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. Author manuscript; available in PMC: 2020 Apr 22.
Published in final edited form as: Wiley Interdiscip Rev RNA. 2019 Nov 3;11(1):e1573. doi: 10.1002/wrna.1573

Table 1.

RNA-binding domains and protein engineering attempts.

RBD Engineered? Size (Amino Acids) RNA Target Representative References
RRM Yes 85 ssRNA, Stem-loop RNA (Laird-Offringa and Belasco 1995)
dsRBD Yes 68 dsRNA (A-form), Stem-loop (Lee, Cho et al. 2010)
PUF Yes 36 ssRNA (Wang, Wang et al. 2013)
Zinc Fingers Yes 30 ssRNA, dsRNA, Stem Loop RNA, Tertiary folded RNA (Hale, Richardson et al. 2018, De Franco, Vandenameele et al. 2019)
KH No 70 ssRNA (Garrey, Cass et al. 2008, Hollingworth, Candel et al. 2012)
RGG Yes 8–17 RNA G-quartet (Takahama, Miyawaki et al. 2015)
PPR Yes 35 ssRNA (Barkan, Rojas et al. 2012, Okuda, Shoki et al. 2014, Kindgren, Yap et al. 2015, Miranda, Rojas et al. 2017)