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. 2020 Feb 25;16(4):2550–2560. doi: 10.1021/acs.jctc.9b01194

Table 4. Average Rhodopsin Tilt Angle and Average Number of POPC–Rhodopsin Contacts Calculated for Simulations with MARTINI 2.2P and MARTINI 2.3P.

MARTINI version   v2.2P v2.3P percentage difference (%)
tilt angle (deg)   16.1 ± 0.4 15.6 ± 0.7 3.2
type of contacts head-protein 319 ± 8 334 ± 6 4.6
tail-protein 736 ± 8 741 ± 4 0.7
head-aromatic residues 63 ± 2 68 ± 1 7.6
tail-aromatic residues 331 ± 4 335 ± 2 1.2