Table 3.
MM-GBSA calculation for selected hit compounds (MM-GBSA was performed on the last 10 ns of the simulation trajectory; mean values are shown with standard error).
Compound ID* | ΔG_Bind | ΔG_Coulomb | ΔG_Covalent | ΔG_Hbond | ΔG_Lipo | ΔG_vdW | ΔG_Packing | ΔG_SolGB |
---|---|---|---|---|---|---|---|---|
C8C | −27.28 ± 4.11 | −8.57 ± 4.56 | 1.59 ± 0.86 | −0.44 ± 0.48 | −7.17 ± 0.79 | −4.15 ± 0.88 | 22.98 ± 2.70 | −31.51 ± 1.99 |
STOCKIN-03432 | −43.58 ± 8.32 | −2.66 ± 8.23 | 2.29 ± 1.42 | −1.27 ± 0.59 | −18.90 ± 1.95 | −1.20 ± 0.65 | 17.11 ± 4.65 | −38.95 ± 3.44 |
25284644 | −63.87 ± 3.77 | −18.97 ± 6.26 | 1.70 ± 0.78 | −0.58 ± 0.22 | −22.57 ± 1.08 | −1.91 ± 0.42 | 24.46 ± 6.19 | −46.00 ± 1.99 |
32927247 | −43.94 ± 4.30 | −13.76 ± 3.28 | 1.01 ± 0.75 | −0.56 ± 0.17 | −12.58 ± 1.46 | −0.98 ± 0.65 | 20.27 ± 1.89 | −37.35 ± 2.02 |
27371521 | −61.30 ± 3.15 | −19.44 ± 3.85 | 1.67 ± 1.95 | −1.80 ± 0.29 | −14.91 ± 0.85 | −4.24 ± 0.48 | 21.64 ± 3.27 | −44.22 ± 2.04 |
2801237 | −37.65 ± 3.69 | −4.73 ± 2.80 | 0.66 ± 1.57 | −0.52 ± 0.19 | −10.85 ± 1.44 | −0.18 ± 0.22 | 14.89 ± 2.06 | −36.99 ± 2.34 |
5633879 | −74.01 ± 3.21 | −25.67 ± 2.49 | 2.03 ± 0.76 | −2.57 ± 0.17 | −24.31 ± 1.31 | −2.81 ± 0.60 | 30.14 ± 1.81 | −50.82 ± 1.68 |
36994203 | −62.94 ± 3.98 | −21.86 ± 4.04 | −0.22 ± 0.87 | −1.74 ± 0.23 | −16.12 ± 1.85 | −1.30 ± 0.46 | 15.45 ± 1.54 | −37.16 ± 1.97 |
16694164 | −57.61 ± 4.61 | −12.84 ± 4.46 | −1.49 ± 2.18 | −1.53 ± 0.23 | −17.02 ± 2.37 | −3.06 ± 0.48 | 21.50 ± 3.16 | −43.17 ± 2.78 |
13477729 | −51.22 ± 4.96 | −16.58 ± 3.27 | 2.32 ± 0.83 | −1.11 ± 0.29 | −15.49 ± 1.60 | −2.23 ± 0.43 | 25.84 ± 2.72 | −43.97 ± 2.09 |
36657947 | −46.58 ± 2.81 | −16.22 ± 3.04 | 1.60 ± 1.09 | −0.51 ± 0.06 | −15.32 ± 0.90 | 0.00 ± 0.01 | 23.40 ± 1.98 | −39.53 ± 2.52 |
36716128 | −53.39 ± 2.70 | −7.03 ± 2.27 | 1.09 ± 0.68 | −1.03 ± 0.17 | −13.10 ± 0.72 | −2.71 ± 0.58 | 17.35 ± 1.71 | −47.98 ± 1.76 |
3325122 | −49.38 ± 6.36 | −11.88 ± 6.41 | 2.43 ± 1.87 | −1.03 ± 0.46 | −17.42 ± 1.31 | −1.43 ± 0.77 | 16.48 ± 4.63 | −36.53 ± 2.45 |
42888719 | −39.14 ± 3.34 | −12.85 ± 4.11 | 0.89 ± 0.72 | −0.30 ± 0.25 | −12.81 ± 0.86 | −0.13 ± 0.17 | 20.03 ± 2.43 | −33.97 ± 1.89 |
IP6 | −68.48 ± 6.00 | −32.19 ± 12.56 | 2.26 ± 1.82 | −1.21 ± 0.48 | −22.35 ± 1.53 | −5.07 ± 1.46 | 33.41 ± 10.84 | −43.33 ± 3.68 |
31879059 | −60.16 ± 4.30 | −13.68 ± 3.94 | 1.36 ± 1.66 | −0.37 ± 0.21 | −23.17 ± 1.33 | −3.32 ± 0.63 | 20.42 ± 3.30 | −41.40 ± 2.34 |
31966421 | −56.35 ± 5.39 | −20.05 ± 4.84 | 1.12 ± 1.12 | −1.80 ± 0.42 | −15.22 ± 0.81 | −2.90 ± 0.64 | 24.30 ± 2.18 | −41.80 ± 2.59 |
7658775 | −57.55 ± 3.89 | −17.07 ± 4.14 | 1.91 ± 0.81 | −1.47 ± 0.20 | −20.30 ± 1.32 | −2.31 ± 0.42 | 30.92 ± 2.43 | −49.23 ± 1.88 |
25665268 | −33.80 ± 7.86 | −15.01 ± 6.94 | 2.48 ± 1.58 | −1.23 ± 0.48 | −9.25 ± 2.06 | −0.39 ± 0.58 | 18.20 ± 4.60 | −28.59 ± 5.57 |
37101119 | −47.54 ± 5.20 | −10.53 ± 4.71 | −0.64 ± 2.32 | −0.66 ± 0.68 | −14.42 ± 1.60 | −2.27 ± 0.57 | 21.20 ± 2.28 | −40.21 ± 2.52 |
The name of the compounds for these given compound ID is mentioned in the Supplementary File.