TABLE 1.
Name/ | Signal peptide/ | Genomic | Coding | No of | Protein | LysM | No. Cys |
protein ID | Transmembrane§ | sequences | sequences | introns | length | modules§ | residuesλ̄ |
LYSM1# | Transmembrane (87–109) | 534 bp | 531 bp | 0 | 177 aa | 1 (127–171) | 4 (3) |
LYSM2 | Signal peptide (1–23) | 1513 bp | 1392 bp | 2 | 464 aa | 2 (235–280; 289–339) | 22 (3; 3) |
CHIC2 | Signal peptide (1–20) | 2955 bp | 2598 bp | 2 | 866 aa | 2 (309–354; 372–419) | 32 (3; 5) |
MT037016# | No | 1440 | 1341 | 1 | 447 aa | 1 (121–165) | 7 (1) |
MT037017# | No | 852 | 828 | 1 | 276 aa | 3 (5–47; 122–160; 229–275) | 11 (3; 3; 3) |
ChtBD1, chitin-binding (CBM18) module; GH18, glycoside hydrolase family 18 module. #Secreted through a non-classical secretion pathway (SecretomeP score ≥ 0.91). §Number in parenthesis denotes the amino acid positions from N-terminus. CHIC2 contains additional modules ChtBD1 and GH18 between the amino acid position 443–449 and 513–862, respectively. λ̄Number in parenthesis denotes the Cys residues present in each LysM module. Gene encoding putative LysM protein with GenBank accession number MT037016, and gene encoding LysM protein GenBank accession number: MT037017 was found only in C. chloroleuca and C. solani, respectively.