Fig. 2.

Optimization of cutoffs for pseudocount models M0–M4. (A) $C_{\mathrm{IS}-\mathrm{score}}$, IS-score cutoff, (B) $C_{\mathrm{linkscore}}$, the link score cutoff, (C) $C_{\mathrm{maxID}}$, the maximum sequence identity cutoff and (D) $C_{\mathrm{minID}}$, the minimum sequence identity cutoff