Table 3.
PCR conditions and identification methods for periodontal pathogens in atherothrombotic samples
Authors (year) | PCR protocol | Cycle (n) | Data analysis |
---|---|---|---|
Haraszthy et al. (2000) [11] | Conventional qualitative | 30 | Hybridization |
Okuda et al. (2001) [32] | 32 or 36 | Clonage and sequencing | |
Taylor-Robinson et al. (2002) [33] | 36 | Unknown | |
Ishihara et al. (2004) [19] | 36 | Sequencing | |
Kurihara et al. (2004) [26] | 36 | Agarose gel | |
Marques da Silva et al. (2005) [27] | 32 | Agarose gel | |
Padilla et al. (2006) [8] | 30 | Agarose gel | |
Pucar et al. (2007) [20] | 35 | Polyacrylamide gel | |
Elkaïm et al. (2008) [31] | 30 | Hybridization | |
Nakano et al. (2009) [28] | 36 | Unknown | |
Mahendra et al. (2009) [22] | 36 | Agarose gel and sequencing | |
Aquino et al. (2011) [18] | 36 | Agarose gel | |
Toyofuku et al. (2011) [9] | 36 | Gel | |
Fernandes et al. (2014) [16] | 40 | Unknown | |
Rath et al. (2014) [23] | 40 | Agarose gel | |
Mahalakshmi et al. (2017) [24] | 35 or 36 | Gel and sequencing | |
Atarbashi-Moghadam et al. (2018) [25] |
|
35 |
Agarose gel and sequencing |
Fiehn et al. (2005) [13] | Nested and conventional | 30 or 35 | Agarose gel and sequencing |
Aimetti et al. (2007) [14] | Nested | 32 | Agarose gel |
Figuero et al. (2011) [15] | Nested | 35 | Agarose gel and sequencing |
Figuero et al. (2014) [10] |
Nested and quantitative |
40 |
Unknown |
Cairo et al. (2004) [12] | Quantitative | 35 | Agarose gel |
Kozarov (2005) [2] | 40 | Melting curve | |
Kozarov et al. (2006) [17] | 40 | Melting curve | |
Gaetti-Jardim et al. (2009) [21] | 40 or 45 | Melting curve | |
Delbosc et al. (2011) [29] | 50 | Agarose gel | |
Pyysalo et al. (2013) [30] | 60 | Melting curve | |
Rangé et al. (2014) [4] | 50 | Gel and sequencing |