Table 1.

Average performance of eight methods in two groups of simulation datasets and 10 real datasets.

	Simulation and real data
	Splat balance		Splat imbalance		Real dataset
	ARI	NMI	ARI	NMI	ARI	NMI
CIDR	0.19	0.24	0.35	0.37	0.41	0.50
SIMLR	0.19	0.34	0.20	0.34	0.55	0.67
scDeepCluster	0.25	0.30	0.46	0.54	0.49	0.69
mask MSE	0.39	0.45	0.57	0.58	0.71	0.69
weight MSE	0.76	0.78	0.86	0.85	0.71	0.69
ZINB	0.79	0.80	0.81	0.87	0.76	0.77
D-scDMFK	0.87	0.85	0.86	0.87	0.79	0.80
scDMFK	0.81	0.80	0.89	0.84	0.84	0.82

The bold values represent the maximum value of the corresponding column.