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. 2020 Apr 24;15(4):e0231752. doi: 10.1371/journal.pone.0231752

Table 1. Top 20 up- and down-regulated genes in Cyp1b1-/-AC.

Symbol Description Log2FC p-value FDR
Up-regulated
Eif2s3y eukaryotic translation initiation factor 2, subunit 3, structural gene Y-linked 12.01499 0 0
Uty ubiquitously transcribed tetratricopeptide repeat gene, Y chromosome 11.91885 3.6E-164 1.9E-161
Ddx3y DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked 11.79096 0 0
Kdm5d lysine (K)-specific demethylase 5D 10.28087 8.9E-151 4E-148
Gm43302 predicted gene 43302 9.580986 1.21E-12 2E-11
Rpl15-ps2 ribosomal protein L15, pseudogene 2 9.550535 2.2E-235 3.8E-232
Bmp8b bone morphogenetic protein 8b 8.847732 0 0
Cysltr1 cysteinyl leukotriene receptor 1 8.342675 1.93E-30 1.16E-28
Gm26760 predicted gene, 26760 8.102196 5.58E-28 2.97E-26
Gm10020 predicted pseudogene 10020 7.874941 1.6E-233 2.5E-230
Gm6969 predicted pseudogene 6969 6.85453 7.82E-74 1.63E-71
Dsp desmoplakin 6.813457 9.78E-10 1.13E-08
Actg-ps1 actin, gamma, pseudogene 1 6.722348 1.08E-11 1.58E-10
Sgsm1 small G protein signaling modulator 1 6.689262 1.12E-59 1.78E-57
Cdx2 caudal type homeobox 2 6.474141 2.61E-26 1.27E-24
Gm38312 predicted gene, 38312 6.410902 1.62E-77 3.66E-75
Oxct2b 3-oxoacid CoA transferase 2B 6.374568 4.13E-23 1.59E-21
AI593442 expressed sequence AI593442 6.040882 1.6E-116 6E-114
Gm45315 predicted gene 45315 6.018783 7.76E-65 1.3E-62
Adarb2 adenosine deaminase, RNA-specific, B2 5.88212 2.23E-18 6.17E-17
Down-regulated
Ptprf protein tyrosine phosphatase, receptor type, F -1.009044 3.978E-53 5.686E-51
Gprc5a G protein-coupled receptor, family C, group 5, member A -1.02267 2.718E-12 4.306E-11
Vax2 ventral anterior homeobox 2 -1.025959 5.515E-10 6.507E-09
Fgf10 fibroblast growth factor 10 -1.028563 3.695E-21 1.264E-19
Stard9 START domain containing 9 -1.030828 2.45E-13 4.349E-12
Lmo1 LIM domain only 1 -1.031322 5.887E-17 1.438E-15
Prl2c3 prolactin family 2, subfamily c, member 3 -1.034173 1.076E-22 4.025E-21
Gm27177 predicted gene 27177 -1.034225 3.073E-17 7.67E-16
Tgfb3 transforming growth factor, beta 3 -1.035388 2.308E-12 3.687E-11
Flrt3 fibronectin leucine rich transmembrane protein 3 -1.038403 8.71E-09 8.981E-08
Acsf2 acyl-CoA synthetase family member 2 -1.040813 9.692E-12 1.426E-10
Ppic peptidylprolyl isomerase C -1.042228 5.977E-32 3.847E-30
Eif3j1 eukaryotic translation initiation factor 3, subunit J1 -1.042647 4.709E-42 5.158E-40
Mical1 microtubule associated monooxygenase, calponin and LIM domain containing 1 -1.046611 1.687E-09 1.899E-08
Ndrg2 N-myc downstream regulated gene 2 -1.047743 2.791E-13 4.941E-12
Ptgs1 prostaglandin-endoperoxide synthase 1 -1.0487 5.856E-29 3.273E-27
Cbr3 carbonyl reductase 3 -1.050294 2.114E-16 4.933E-15
Slfn8 schlafen 8 -1.061261 4.262E-23 1.64E-21
Aplp1 amyloid beta (A4) precursor-like protein 1 -1.075804 8.932E-14 1.662E-12
Steap3 STEAP family member 3 -1.08044 5.467E-14 1.046E-12

The cutoff criteria for this list was any DEG with a FC> 5.88 for upregulation and FC> -1.009 for downregulation.