Table 2. GSEA results showing pathways enriched in the top or bottom of the ranked list (part 1).

gsea_report_for_h_1569243707744
PATHWAY	SIZE	ES	NES	NOM p-val	FDR q-val	FWER p-val
KEGG_REGULATION_OF_ACTIN_CYTOSKELETON	213	0.66964203	2.5797722	0	0	0
KEGG_FOCAL_ADHESION	199	0.75337255	2.5684252	0	0	0
KEGG_GAP_JUNCTION	90	0.67211634	2.565771	0	0	0
KEGG_PATHWAYS_IN_CANCER	325	0.6266958	2.541297	0	0	0
KEGG_VASCULAR_SMOOTH_MUSCLE_CONTRACTION	115	0.68861216	2.5375874	0	0	0
KEGG_CHEMOKINE_SIGNALING_PATHWAY	188	0.7085286	2.5059814	0	0	0
KEGG_BASAL_CELL_CARCINOMA	55	0.6802519	2.3073714	0	4.55E-05	0.001
KEGG_RENAL_CELL_CARCINOMA	70	0.65006334	2.3362064	0	4.73E-05	0.001
KEGG_ADHERENS_JUNCTION	73	0.6770658	2.3461874	0	4.91E-05	0.001
KEGG_MELANOGENESIS	101	0.615403	2.3612275	0	5.12E-05	0.001
KEGG_FC_EPSILON_RI_SIGNALING_PATHWAY	79	0.63750756	2.3671906	0	5.34E-05	0.001
KEGG_CELL_ADHESION_MOLECULES_CAMS	131	0.76282525	2.3726993	0	5.58E-05	0.001
KEGG_LEUKOCYTE_TRANSENDOTHELIAL_MIGRATION	116	0.6907626	2.3731625	0	5.85E-05	0.001
KEGG_T_CELL_RECEPTOR_SIGNALING_PATHWAY	108	0.6633691	2.383714	0	6.14E-05	0.001
KEGG_PANCREATIC_CANCER	70	0.63705605	2.2872703	0	6.39E-05	0.002
KEGG_ECM_RECEPTOR_INTERACTION	84	0.8301615	2.3839304	0	6.47E-05	0.001
KEGG_NEUROACTIVE_LIGAND_RECEPTOR_INTERACTION	271	0.62170815	2.2894022	0	6.60E-05	0.002
KEGG_ADIPOCYTOKINE_SIGNALING_PATHWAY	67	0.6279159	2.2899668	0	6.82E-05	0.002
KEGG_JAK_STAT_SIGNALING_PATHWAY	155	0.61718726	2.3874989	0	6.83E-05	0.001
KEGG_HEMATOPOIETIC_CELL_LINEAGE	85	0.7675451	2.2916093	0	7.05E-05	0.002
KEGG_PROSTATE_CANCER	89	0.6342127	2.3921416	0	7.23E-05	0.001
KEGG_HYPERTROPHIC_CARDIOMYOPATHY_HCM	83	0.6716272	2.2937078	0	7.30E-05	0.002
KEGG_DILATED_CARDIOMYOPATHY	90	0.7019853	2.3925047	0	7.68E-05	0.001
KEGG_DORSO_VENTRAL_AXIS_FORMATION	24	0.7876579	2.3928838	0	8.19E-05	0.001
KEGG_AXON_GUIDANCE	129	0.6520283	2.4046438	0	8.78E-05	0.001
KEGG_MAPK_SIGNALING_PATHWAY	267	0.5887808	2.4121554	0	9.45E-05	0.001
KEGG_CYTOKINE_CYTOKINE_RECEPTOR_INTERACTION	264	0.67623246	2.4139163	0	1.02E-04	0.001
KEGG_CALCIUM_SIGNALING_PATHWAY	177	0.63363373	2.4335191	0	1.12E-04	0.001
KEGG_MELANOMA	71	0.6444286	2.4477468	0	1.23E-04	0.001
KEGG_FC_GAMMA_R_MEDIATED_PHAGOCYTOSIS	96	0.64547414	2.2792652	0	1.27E-04	0.003
gsea_report_for_l_1569243707744
PATHWAY	SIZE	ES	NES	NOM p-val	FDR q-val	FWER p-val
KEGG_PARKINSONS_DISEASE	128	-0.7638063	-2.1532152	0	0.003386	0.014
KEGG_OXIDATIVE_PHOSPHORYLATION	131	-0.7945146	-2.181362	0	0.00531	0.011
KEGG_RIBOSOME	87	-0.9401583	-2.0572634	0	0.006679	0.041
KEGG_HUNTINGTONS_DISEASE	180	-0.62558216	-2.0771437	0	0.006703	0.032