Table 3. GSEA results showing pathways enriched in the top or bottom of the ranked list (part 2).

gsea_report_for_h_1569251519150
PATHWAY	SIZE	ES	NES	NOM p-val	FDR q-val	FWER p-val
HALLMARK_KRAS_SIGNALING_UP	200	0.68496144	2.5519905	0	0	0
HALLMARK_MYOGENESIS	200	0.7163382	2.4803855	0	0	0
HALLMARK_INFLAMMATORY_RESPONSE	200	0.74277735	2.4324496	0	0	0
HALLMARK_IL2_STAT5_SIGNALING	200	0.64027786	2.404173	0	0	0
HALLMARK_APICAL_JUNCTION	200	0.66379976	2.2760096	0	0	0
HALLMARK_COMPLEMENT	200	0.64504373	2.269838	0	0	0
HALLMARK_EPITHELIAL_MESENCHYMAL_TRANSITION	198	0.84459037	2.4160647	0	0	0
HALLMARK_UV_RESPONSE_DN	142	0.7505294	2.5657384	0	0	0
HALLMARK_COAGULATION	138	0.6745744	2.3511252	0	0	0
HALLMARK_TGF_BETA_SIGNALING	54	0.7044607	2.3415003	0	0	0
HALLMARK_ANGIOGENESIS	36	0.78319705	2.304125	0	0	0
HALLMARK_IL6_JAK_STAT3_SIGNALING	87	0.7255876	2.219405	0	2.10E-04	0.003
HALLMARK_HEDGEHOG_SIGNALING	36	0.70793414	2.135469	0	8.37E-04	0.008
HALLMARK_ALLOGRAFT_REJECTION	200	0.6927329	2.1372313	0.0020243	9.02E-04	0.008
HALLMARK_NOTCH_SIGNALING	32	0.64948887	2.1142936	0	0.001424	0.016
HALLMARK_APOPTOSIS	161	0.5897472	2.1039493	0	0.0015353	0.018
HALLMARK_HYPOXIA	197	0.5773829	2.0876963	0	0.0018728	0.024
HALLMARK_APICAL_SURFACE	44	0.6299601	2.0555112	0.0019011	0.0022883	0.031
gsea_report_for_l_1569251519150
PATHWAY	SIZE	ES	NES	NOM p-val	FDR q-val	FWER p-val
HALLMARK_OXIDATIVE_PHOSPHORYLATION	200	-0.81177884	-2.1761758	0	0.0027603	0.007
HALLMARK_MYC_TARGETS_V1	199	-0.7470366	-1.9788883	0.004065	0.0174095	0.064
HALLMARK_MYC_TARGETS_V2	58	-0.79232734	-1.9486467	0.0041068	0.0176199	0.085