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. 2020 Apr 8;27(4):485–499. doi: 10.1089/cmb.2019.0322

Table 4.

The Memory Required for Mantis Build and Minimum Spanning Tree Compression Phases on Human RNA-Seq Data

Data set No. of samples Mantis build memory (GB) MST build memory (GB)
H. sapiens RNA-seq samples 200 5 8
500 10 16
1000 18 29
2000 25 29
5000 58 59
10,000 111 111
BBB 2586 28 29

The overall memory required to construct the full index is the max of the two columns which, for these datasets, is always the MST memory.