Table 4.
The Memory Required for Mantis Build and Minimum Spanning Tree Compression Phases on Human RNA-Seq Data
| Data set | No. of samples | Mantis build memory (GB) | MST build memory (GB) |
|---|---|---|---|
| H. sapiens RNA-seq samples | 200 | 5 | 8 |
| 500 | 10 | 16 | |
| 1000 | 18 | 29 | |
| 2000 | 25 | 29 | |
| 5000 | 58 | 59 | |
| 10,000 | 111 | 111 | |
| BBB | 2586 | 28 | 29 |
The overall memory required to construct the full index is the max of the two columns which, for these datasets, is always the MST memory.