Table 1.
Oligonucleotides used for cDNA synthesis and amplification in this study. Nucleotide position refers to the sequence of the feline NoV cat/TE/77-13/ITA (GenBank accession no. KT245136).
| Oligonucleotide | Position | Sequence (5' to 3′) | Sense | Reference |
|---|---|---|---|---|
| p290 | 2–24 | GATTACTCCAAGTGGGACTCCAC | + | Jiang et al. (1999) |
| p289 | 299–317 | TGACAATGTAATCATCACCATA | − | Jiang et al. (1999) |
| JV12Y | 40–60 | ATACCACCTATGATGCAGAYTA | + | Vennema et al. (2002) |
| JV13I | 292–312 | TCATCATCACCATAGAAGAG | − | Vennema et al. (2002) |
| FeNoV-201 | 201–221 | TCAACAGCATCGCCCACTGGA | + | This study |
| FeNoV-550 | 550–572 | GCATCATCGTCTCGTTGGGGTCC | − | This study |
| FeNoV-852 | 852–870 | CCAGAGAGTCAACAAGAGG | + | This study |
| FeNoV-1026 | 1026–1043 | AGGGCCAAGCTCGAGATC | − | This study |
| FeNoV-1084 | 1084–1114 | TGGAGGGATGGAAGTGCAGAT | + | This study |
| FeNoV-1581 | 1581–1601 | ATCCAGGGTGCACCTGCCATT | − | This study |
| FeNoV-1581 | 1581–1601 | AATGGCAGGTGCACCCTGGAT | + | This study |
| FeNoV-2094 | 2094–2113 | TACAACGGGGCCATAGGGGA | + | This study |
| FeNoV-2094 | 2094–2113 | TCCCCTATGGCCCCGTTGTA | − | This study |
| FeNoV-2452 | 2452–2472 | CAGTTCCCACAGGGCTGAGTG | − | This study |
| FeNoV-2729 | 2729–2749 | GAAGCCGCCCTTGCGCAACGC | − | This study |
| FeNoV-2729 | 2729–2749 | GCGTTGCGCAAGGGCGGCTTC | + | This study |
| FeNoV-2851 | 2851–2872 | GGTGGCCATGCCAGAGTACCCT | − | This study |
| FeNoV-3198 | 3281–3297 | TTGGACTCACCTCTGCG | − | This study |
| QT | 3′/5′ end | CCAGTGAGCAGAGTGACGAGGACTCGAGCTCAAGCTTTTTTTTTTTTTTTTT | +/− | Scotto-Lavino et al. (2006) |
| Qo | 3′/5′ end | CCAGTGAGCAGAGTGACG | +/− | Scotto-Lavino et al. (2006) |
| QI | 3′ end | GAGGACTCGAGCTCAAGC | − | Scotto-Lavino et al. (2006) |