Table 1.
AAa | Codon | RSCUd | AAa | Codon | RSCUd |
---|---|---|---|---|---|
Alab | GCA | 1.223 | Leuc | CUA | 0.807 |
GCCf | 0.996 | CUC | 1.131 | ||
GCGg | 0.536 | CUGf | 0.976 | ||
GCU | 1.245 | CUU | 1.119 | ||
Argb | AGAf | 1.853 | UUAg | 0.805 | |
AGG | 1.702 | UUG | 1.159 | ||
CGAg | 0.568 | Lysc | AAAg | 0.907 | |
CGC | 1.020 | AAGf | 1.093 | ||
CGG | 0.388 | Pheb | UUCf | 0.979 | |
CGU | 0.469 | UUUg | 1.020 | ||
Asnc | AACf | 1.091 | Prob | CCA | 1.589 |
AAUg | 0.909 | CCCf | 0.881 | ||
Aspb | GACf | 0.900 | CCGg | 0.405 | |
GAUg | 1.100 | CCU | 1.124 | ||
Cysb | UGCf | 0.972 | Serb | AGCf | 0.994 |
UGUg | 1.028 | AGU | 1.172 | ||
Glnb | CAAg | 1.103 | UCA | 1.315 | |
CAGf | 0.897 | UCC | 1.133 | ||
Gluc | GAAg | 0.933 | UCGg | 0.367 | |
GAGf | 1.067 | UCU | 1.019 | ||
Glyb | GGA | 0.997 | Thrc | ACA | 1.201 |
GGCf | 0.498 | ACCf | 1.221 | ||
GGG | 0.994 | ACGg | 0.376 | ||
GGUg | 1.499 | ACU | 1.202 | ||
Hisc | CACf | 1.253 | Tyrc | UACf | 1.092 |
CAUg | 0.747 | UAUg | 0.908 | ||
Ileb | AUAg | 0.691 | Valc | GUAg | 0.471 |
AUCf | 1.048 | GUC | 0.893 | ||
AUU | 1.261 | GUGf | 1.678 | ||
GUU | 0.958 |
Stands for amino acid.
Stands for amino acids whose optimal codons are A- or U-end.
Stands for amino acids whose optimal codons are C- or G-end.
Stands for the relative synonymous codon usage value.
Stands for the optimal codons used in human cells (Pintó et al., 2007, Sánchez et al., 2003).
Stands for the rare codons used in human cells (Pintó et al., 2007, Sánchez et al., 2003).