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. 2018 Dec 6;68:58–67. doi: 10.1016/j.meegid.2018.12.010

Table 4.

Nucleotide and deduced amino acid sequence identities of the complete polyprotein gene and L, P1-P3 regions between two Chinese FeKoV strains, 16JZ0605 and 17CC0811, and other kobuviruses.


FeKoV
CaKoV
AiV
MoKoV
17CC0811
12D240
FK-13
TE/52
WHJ-1
UK003
AiV1
M-5
MH159813 KJ958930 KF831027 KM091960 MF598159 KC161964 AB040749 JF755427
16JZ0605/MH159814 (percentage of nucleotide identity/percentage of amino acid identity)
Polyprotein 94.8/98.5 93.0/97.0 92.9/97.9 93.4/97.3 94.0/98.3 80.6/85.8 75.3/78.8 77.1/81.5
L 93.5/97.0 91.3/91.5 91.9/94.6 93.7/96.4 93.5/97.0 68.5/67.7 62.9/56.4 64.7/58.1
P1 95.9/99.4 92.6/97.5 92.5/97.9 92.8/97.4 93.2/98.1 79.3/83.5 73.9/76.6 75.0/79.7
P2 94.8/98.4 93.7/99.1 94.2/98.9 94.2/98.1 95.2/98.6 82.3/87.7 76.2/81.4 78.7/84.1
P3 93.8/97.8 93.5/97.9 92.7/97.8 93.4/96.5 94.0/98.1 83.2/90.8 78.8/83.7 80.7/86.4



17CC0811/MH159813 (percentage of nucleotide identity/percentage of amino acid identity)
Polyprotein 100/100 93.2/96.8 92.9/97.9 93.1/97.3 94.9/98.4 81.0/85.5 75.2/78.4 76.9/81.3
L 100/100 94.4/93.9 93.5/97.6 94.2/98.8 94.8/100 68.5/67.7 62.2/55.2 63.5/57.5
P1 100/100 93.0/97.3 92.7/97.5 92.8/97.2 94.4/98.0 79.4/83.3 74.2/76.7 75.2/79.7
P2 100/100 94.0/98.4 94.1/98.6 94.1/97.3 95.5/99.2 83.3/87.3 75.7/80.7 78.5/83.6
P3 100/100 92.3/97.6 92.0/97.9 92.3/97.0 95.2/98.5 83.6/90.4 78.7/83.3 80.2/86.3

FeKoV, Feline Kobuvirus; CaKoV, Canine kobuvirus; AiV, Aichi Virus; MoKoV, Murine Kobuvirus.