Table 1.
(a) Feline coronavirus (FCoV) primers and probe for the FCoV fluorogenic assay; (b) position of primers and probe in the sequence of the FCoV 7b gene
Primer or probe |
Sequence (5′→3′) |
Length of fragment (bp) |
|||
(a) | |||||
Forward primer FcoV1128f | GAT TTG ATT TGG CAA TGC TAG ATT T | ||||
Reverse primer FcoV1229r | AAC AAT CAC TAG ATC CAG ACG TTA GCT | 102 | |||
Probe FCoV1200p | aTCC ATT GTT GGC TCG TCA TAG CGG Ab | ||||
(b) | |||||
1001 | GGCAACCCGA | TGTCTAAAAC | TGGTCTTTCC | GAGGAATTAC | GGGTCATCGC |
1051 | GCTGCCTACT | CTTGTACAGA | ATGGTAAGCA | CGTGTAATAG | GAGGTACAAG |
FCoV1128→ | |||||
1101 | CAACCCTATT | GCATATTAGG | AAGTTTAGAT | TTGATTTGGC | AATGCTAGAT |
←FCoV1200p | |||||
1151 | TTAGTAATTT | AGAGAAGTTT | AAAGATCCGC | TATGACGAGC | CAACAATGGA |
←FCoV1229r | |||||
1201 | AGAGCTAACG | TCTGGATCTA | GTGATTGTTT | AAAATGTAAA ATTGTTTGAA | |
1251 | AATTTTCCTT | TTGATAGTGA | TG |
Reporter dye (FAM) labeled nucleotide.
Quencher dye (TAMRA) labeled nucleotide.