TABLE 5.
Genetic correlation estimates between population groups (POP1, POP2, and POP3) by bivariate GREML for two phenotypes.
| Phenotype | Genetic correlation between POP1 and POP2 |
Genetic correlation between POP2 and POP3 |
Genetic correlation between POP1 and POP3 |
||||||
| Estimate | SE | P-value | Estimate | SE | P-value | Estimate | SE | P-value | |
| Qualifications | 0.2554 | 0.2223 | 8.09E−04 | 0.4795 | 0.1550 | 7.85E−04 | 0.5676 | 0.2743 | 0.1149 |
| Age first had sexual intercourse | 0.7418 | 0.3984 | 0.5169 | 0.0491 | 0.2284 | 3.14E−05 | 1.2176 | 0.3629 | 0.5488 |
The phenotypes were adjusted by basic plus additional confounders of fixed effects and transformed by rank-based INT. The bivariate GREML results for qualifications indicated a significant genetic heterogeneity between POP1 and POP2 (p-value = 8.09E−04), and between POP2 and POP3 (p-value = 7.85E−04), but showed no genetic heterogeneity between POP1 and POP3. These results were consistent with our findings from the G × P RNM. For age first had sexual intercourse, the bivariate GREML detected a significant heterogeneity between POP2 and POP3 (p-value = 3.14E−05), however, there was no interaction signal between POP1 and POP3 (as expected). Unexpectedly, the bivariate GREML failed to find genetic heterogeneity across POP1 + POP2 although RNM provided a significant signal. SE denotes standard error. P-value was obtained through a Wald test under a null hypothesis that genetic correlation equals to 1.