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. 2020 Apr 21;11:692. doi: 10.3389/fmicb.2020.00692

TABLE 1.

Summary of 26 putative Plasmopara viticola RxLR effectors description.

Effectors Peptide size Signaip prediction SignalP3-HMM RxLR conserved motifs EER motif Effectors conserved prediction Genomic location
PvAVH1 312 1–20 1 RLLR DEER 46–61 scaffold_4:1041171-1042109
PvAVH33 559 1–21 0.999 RLLR 29–32 scaffold_140:87996-89675
PvAVH36 726 1–19 1 RVLP DLKNKWAVHAGGEDR 30–52 scaffold_128:53655-55835
PvAVH147 377 1–25 0.977 RGLK DEEAR 21–43 scaffold_59:284672-285805
PvAVH3 642 1–21 0.999 RFLR DEER 20–50 scaffold_584:8728-10656
PvAVH8(PvRxLR11a) 202 1–23 0.992 RSLD DEER 49–61 scaffold_4:1177443-1178051
PvAVH76 630 1–19 0.997 RDSR DEER 31–49 scaffold_19:447692-449584
PvAVH21 620 1–23 0.905 RFLR DEER 28–49 scaffold_19:695886-697748
PvAVH123 117 1–23 0.938 RFLQ DEER 46–67 scaffold_19:781377-781730
PvAVH11 514 1–25 0.989 RSLQ DSEER 53–70 scaffold_76:145128-146672
PvAVH133 724 1–21 1 RILR DEER 30–51 scaffold_128:156764-158938
PvAVH135 722 1–23 0.999 RILR DEER 28–49 scaffold_128:171504-173672
PvAVH67 414 1–19 0.998 RFLL DESR 36–51 scaffold_143:19374-20618
PvAVH53 526 1–21 0.999 RVIR DAGNGER 30–51 scaffold_128:17264-18844
PvAVH103(PvRxLR9b) 116 1–17 0.987 RILR DGNVNREQER 49–64 scaffold_141:183645-183995
PvAVH30 445 1–19 1 KLLR DNATNESR 34–41 scaffold_143:88038-89375
PvAVH56 572 1–22 0.999 RDPK DLKLSAGNEER 39–50 scaffold_140:107427-109145
PvAVH35 720 1–23 1 RNLK DEER 37–52 scaffold_140:56540-58702
PvAVH61 729 1–19 0.999 RVLR DFTLSAGNEER 30–52 scaffold_140:44341-46530
PvAVH51 502 1–21 0.999 RVFR DAGNGER 30–51 scaffold_128:4980-6488
PvAVH52 526 1–19 0.999 HVLR DAGSEER 31–53 scaffold_128:92002-93582
PvAVH71 527 1–19 0.988 HVLR DAGSEER 31–53 scaffold_128:45536-47119
PvAVH102 520 1–19 0.998 HVLR DAGSEER 31–53 scaffold_128:32477-34039
PvAVH47 399 1–25 0.999 RILR DEER 30–57 scaffold_128:247-1446
PvAVH88 486 1–30 0.995 RNLA DDER 36–73 scaffold_59:287955-289415
PvAVH54804 249 1–21 0.995 RPLG DDTNGEDR 53–70