Table 2.
Number of Single Nucleotide Polymorphism Sites and Polymorphism Types Among Edited and Unedited Sites in Drosophila Populations and Human
| DGRP2 |
FL |
ME |
Human–genicc |
Human–intergenicc |
||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Edited (%) | Uneditedb (%) | Edited (%) | Unedited (%) | Edited (%) | Unedited (%) | Edited (%) | Unedited (%) | Edited (%) | Unedited (%) | |
| Polymorphic | 755 (21) | 3,951,070 (2) | 543 (15) | 1,367,160 (1) | 507 (14) | 1,235,454 (1) | 231 (19) | 176,080 (6) | 110 (18) | 196,030 (6) |
| Not polymorphic | 2,826 (79) | 171,048,930 (98) | 3,038 (85) | 118,920,513 (99) | 3,074 (86) | 119,052,219 (99) | 977 (81) | 2,811,804 (94) | 520 (82) | 3,017,246 (94) |
| Polymorphisma | ||||||||||
| A, G | 740 (98) | 817,333 (45) | 536 (99) | 337,098 (48) | 502 (99) | 309,347 (49) | 225 (97) | 102,842 (58) | 105 (96) | 112,936 (58) |
| A, C | 3 (0) | 355,952 (20) | 1 (0) | 142,183 (21) | 0 (0) | 131,624 (20) | 4 (2) | 35,491 (21) | 3 (3) | 38,772 (20) |
| A, T | 12 (2) | 649,599 (35) | 6 (1) | 217,230 (31) | 5 (1) | 195,528 (31) | 2 (1) | 37,747 (21) | 2 (1) | 42,971 (22) |
Note.—Bold values represent increased proportion in edited sites compared with unedited sites.
a
Only biallelic polymorphisms.
b
Assuming an average genome coverage of 175 Mb over the 205 lines (Huang et al. 2014).
c
Polarized data.