Skip to main content
. 2010 Dec 23;28(4):1455–1468. doi: 10.1093/molbev/msq330

Table 2.

Nonsynonymous (dN) and synonymous (dS) substitutions (± standard error) as well as their ratio in ABS and non-ABS assuming concordance with the human MHC I and MHC II-DRB sequences (Bjorkman and Parham 1993; Brown et al. 1993).

MHC Region Sites N dN dS dN/dS P
Class I Exon 2 ABS 18 0.23 ± 0.08 0.08 ± 0.06 2.87 <0.01
Non-ABS 65 0.04 ± 0.01 0.04 ± 0.02 1.00 0.71
All 83 0.08 ± 0.02 0.05 ± 0.02 1.60 0.04
Exon 3 ABS 16 0.18 ± 0.07 0.15 ± 0.13 1.20 0.51
Non-ABS 71 0.02 ± 0.01 0.13 ± 0.04 0.15 <0.01
All 87 0.05 ± 0.01 0.13 ± 0.03 0.38 0.02
Class II-DRB Exon 2 ABS 24 0.21 ± 0.05 0.15 ± 0.08 1.40 0.35
Non-ABS 58 0.04 ± 0.01 0.13 ± 0.05 0.31 0.06
All 82 0.09 ± 0.02 0.13 ± 0.04 0.69 0.25

NOTE.—N is the number of codons in each category. P is the probability that dN and dS are different using a t-test.