Table 2. 2D Performance Metrics for Molecules Generated by DeLinker, Our Deep Generative Model, Compared to a Database Baseline on the Held-Out ZINC Test Set and the Independent CASF Data Set.
ZINC |
CASF |
CASF
≥5 atoms |
||||
---|---|---|---|---|---|---|
metric | Database (%) | DeLinker (%) | Database (%) | DeLinker (%) | Database (%) | DeLinker (%) |
valid | 100.0 | 98.4 | 99.0 | 95.5 | 98.4 | 94.7 |
unique | 38.8 | 44.2 | 43.0 | 51.9 | 58.3 | 72.9 |
novel | 0.0 | 39.5 | 0.0 | 51.0 | 0.0 | 68.7 |
recovered | 78.0 | 79.0 | 42.8 | 53.7 | 14.9 | 29.8 |
pass 2D filters | 97.0 | 89.8 | 95.0 | 81.4 | 93.6 | 71.7 |