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. 2020 Mar 20;60(4):1983–1995. doi: 10.1021/acs.jcim.9b01120

Table 2. 2D Performance Metrics for Molecules Generated by DeLinker, Our Deep Generative Model, Compared to a Database Baseline on the Held-Out ZINC Test Set and the Independent CASF Data Set.

  ZINC
CASF
CASF ≥5 atoms
metric Database (%) DeLinker (%) Database (%) DeLinker (%) Database (%) DeLinker (%)
valid 100.0 98.4 99.0 95.5 98.4 94.7
unique 38.8 44.2 43.0 51.9 58.3 72.9
novel 0.0 39.5 0.0 51.0 0.0 68.7
recovered 78.0 79.0 42.8 53.7 14.9 29.8
pass 2D filters 97.0 89.8 95.0 81.4 93.6 71.7