Table 3.
Number of individuals used to make DNA pools for each family for BSA-ddRAD library construction followed by number of individuals for each six GIFT families, and GIFT and Stirling broodstock for individual analysis with LG23-linked DNA markers
| BSA-ddRADseq analysis | LG23-linked marker analysis | |||
|---|---|---|---|---|
| ID | Strain | Individuals in male progeny pool | Individuals in female progeny pool | Individuals analysed |
| Family 1 | Stirling | 24 | 24 | |
| Family 2 | Stirling | 29 | 29 | |
| Family 1 | GIFT | 25 | 25 | 40 |
| Family 2 | GIFT | 30 | 30 | 40 |
| Family 3 | GIFT | 30 | 30 | 40 |
| Family 4 | GIFT | 30 | 30 | 40 |
| Family 5 | GIFT | 30 | 30 | |
| Family 6 | GIFT | 30 | 30 | |
| Family 7 | GIFT | 15 | 15 | 30 |
| Family 8 | GIFT | 18 | 18 | |
| Family 9 | GIFT | 28 | 28 | |
| Family 10 | GIFT | 15 | 15 | |
| Family 11 | GIFT | 21 | 21 | |
| Family 12 | GIFT | 22 | 22 | |
| Family 13 | GIFT | 30 | 30 | |
| Family 14 | GIFT | 15 | 15 | |
| Family 15 | GIFT | 22 | 22 | |
| Family 16 | GIFT | 17 | 17 | |
| Family 17 | GIFT | 23 | 23 | |
| Family 18 | GIFT | 23 | 23 | |
| Family 19 | GIFT | 30 | 30 | 40 |
| Broodstock | GIFT | 50 | ||
| Broodstock | Stirling | 4 | ||