Table 2.
Probable antigenic epitopes and MHC I Allele interaction based on NETMHC 4.0 server and VaxiJen 2.0 scores (≥1.0) for antigenicity prediction. (* - sign is used for no interaction any HLA Allele under consideration).
| NCBI-GenBank ID | MHC I Allele | POS | Core peptide | 1-LOG50K | Affinity(nM) | Vaxijen score | Antigenicity |
|---|---|---|---|---|---|---|---|
| QHD43417.1 | HLA-A*68:01 | 7 | FTIGTVTLK | 0.853 | 4.9 | 2.0317 | ANTIGEN |
| HLA-A*31:01 | 125 | RLWLCWKCR | 0.74 | 16.59 | 1.1604 | ANTIGEN | |
| QHD43418.1 | – | – | – | – | – | – | NO INTERACTION |
| QHD43419.1 | HLA-A*11:01 | 5 | GTITVEELK | 0.719 | 20.98 | 1.0976 | ANTIGEN |
| QHD43421.1 | HLA-A*11:01 | 109 | ITLCFTLKR | 0.71 | 22.97 | 2.0208 | ANTIGEN |
| HLA-A*68:01 | 109 | ITLCFTLKR | 0.695 | 27.24 | 2.0208 | ANTIGEN | |
| HLA-A*23:01 | 107 | VFITLCFTL | 0.621 | 60.42 | 1.2490 | ANTIGEN | |
| QHD43423.2 | – | – | – | – | – | – | NO INTERACTION |