Table 8.
Summary of the annotated repeat sequences in the O. granulata genome.
| Transposable elements | Length (bp) | Percentage (%) |
|---|---|---|
| DNA transposons | 72,407,795 | 9.83 |
| En-Spm | 10,454,636 | 1.42 |
| Harbinger | 10,685,997 | 1.45 |
| Maverick | 900,730 | 0.12 |
| MuDR | 31,123,966 | 4.23 |
| TcMar-Stowaway | 7,334,046 | 1.00 |
| Tourist | 62,565 | 0.01 |
| hAT | 8,611,368 | 1.17 |
| Helitron | 893,911 | 0.12 |
| Others | 2,340,576 | 0.32 |
| RNA transposons | 376,029,522 | 51.05 |
| Non-LTR retrotransposons | 1,584,873 | 0.22 |
| LINE | 1,459,061 | 0.20 |
| SINE | 125,812 | 0.02 |
| LTR retrotransposons | 374,444,649 | 50.83 |
| Copia | 41,126,935 | 5.58 |
| Gypsy | 278,699,663 | 37.83 |
| Others | 54,618,051 | 7.41 |
| Other repeats | 8,130,028 | 1.10 |
| Low complexity | 764,382 | 0.10 |
| Simple repeats | 3,685,309 | 0.50 |
| Unknown | 3,680,337 | 0.50 |
| Total | 456,567,345 | 61.98 |