Table 2.
Type | Phylogenetic group | Organism | Habitat/Isolation source | Requirements for acetylenotrophy | Products of acetylenotrophy | Reference |
---|---|---|---|---|---|---|
Aerobe | Actinobacteria | Mycobacterium lacticola a,b | Soil (Germany) | C2H2 alone | Acetaldehyde | Birch-Hirschfeld (1932) |
Rhodococcus rhodochrous strain A1a,c | Dutch soil (The Netherlands) | C2H2 alone | Acetaldehyde | de Bont and Peck (1980) and de Bont et al.(1980) | ||
Rhodococcus rhodochrous (ATCC 33258) (isolated and deposited as: Nocardia rhodochrousa) | Agricultural field soil and lake sediment (New Jersey, USA) | C2H2 alone | Acetaldehyde | (Kanner and Bartha (1979) and Kanner and Bartha (1982) | ||
Rhodococcus rhodochrous strain E5d | Agricultural soil | C2H2 alone# | Acetaldehyde, ethanol and acetate | Topp and Germon (1986) and Germon and Knowles (1988) | ||
Rhodococcus opacus strain MoAcy1 (DSM 44186) | Dry garden soil sample near a parking lot (Tübingen, Germany) | C2H2 alone | Not measured | Rosner et al.(1997) | ||
Rhodococcus opacus strain TueAcy1 (DSM 44188) | Dry soil sample (Tübingen, Germany) | C2H2 alone | Not measured | Rosner et al.(1997) | ||
Rhodococcus zopfii strain TueAcy3 (DSM 44189) | Dry soil sample (Tübingen, Germany) | C2H2 and yeast extract | Not measured | Rosner et al.(1997) | ||
Gordonia alkanivorans strain MoAcy2 (DSM 44187) | Dry garden soil sample near a parking lot (Tübingen, Germany) | C2H2 and yeast extract | Not measured | Rosner et al.(1997) | ||
Rhodococcus rhodochrous strain PNKb1e | Freshwater | C2H2 alone | Trace acetaldehyde detected | Woods (1988) | ||
Firmicutes | Bacillus spp.a | Stream sediment and water (Ontario, Canada) | C2H2 alone | Not measured | Tam, Mayfield and Inniss (1983) | |
Anaerobe | Deltaproteobacteria | Pelobacter acetylenicus strain WoAcy1 (DSM 3246T) | Freshwater creek sediment (Germany) | C2H2 alone | Ethanol, acetate and acetaldehyde | Schink (1985) |
Pelobacter acetylenicus strain KoAcy23 | Sewage sludge (Germany) | C2H2 alone | Ethanol, acetate and acetaldehyde | Schink (1985) | ||
Pelobacter acetylenicus strain GhAcy1 (DSM3247) | Marine sediment (Venice, Italy) | C2H2 alone | Ethanol, acetate and acetaldehyde | Schink (1985) | ||
Pelobacter acetylenicus strain GhAcy3 | Marine sediment (Venice, Italy) | C2H2 alone | Ethanol, acetate and acetaldehyde | Schink (1985) | ||
Pelobacter sp. strain SFB93 | Estuarine sediment (San Francisco Bay, California, USA) | C2H2 alone | Acetaldehyde, ethanol, acetate and hydrogen | Culbertson, Strohmaier and Oremland (1988) and Miller et al. (2013) |
Strains were identified using phenotypic characteristics and the listed name corresponds to that used in the original publication. It is important to note that the correct name of the organism may have changed since the original date of publication.
Kanner and Bartha (1979) suggested based on phenotypic characteristics that this organism was mostly likely a Rhodococcus rhodochrous.
de Bont et al. (1980) identified strain A1 as Rhodococcus rhodochrous using DNA–DNA hybridization.
Although originally isolated and cultivated under aerobic conditions Germon and Knowles (1988) showed that strain E5 can degrade acetylene under anaerobic conditions.
Isolation of and metabolism of propane by this organism was reported in Woods and Murrell (1989).