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. Author manuscript; available in PMC: 2020 Apr 30.
Published in final edited form as: Cell Rep. 2020 Apr 7;31(1):107466. doi: 10.1016/j.celrep.2020.03.030

KEY RESOURCES TABLE

REAGENT or RESOURCE SOURCE IDENTIFIER
Antibodies
Goat polyclonal anti-IL-1β R&D Systems Cat#AF-401-NA; RRID:AB_416684
Rabbit polyclonal anti-IL-1β Genetex Cat#GTX74034; RRID:AB_378141
Mouse monoclonal anti-Caspase-1 (clone Casper-1) Adipogen Cat#AG-20B-0042-C100; RRID:AB_2755041
Rat monoclonal anti-Caspase-8 (clone 1G12) Enzo Life Sciences Cat#ALX-804-447-C100; RRID:AB_2050952
Rabbit monoclonal anti-cleaved Caspase-8 (clone D5B2) Cell Signaling Technology Cat#8592; RRID:AB_10891784
Rabbit polyclonal anti-Caspase-3 Cell Signaling Technology Cat#9662; RRID:AB_331439
Rabbit polyclonal anti-cleaved Caspase-3 Cell Signaling Technology Cat#9661; RRID:AB_2341188
Rabbit monoclonal anti-FLIP (clone D5J1E) Cell Signaling Technology Cat#56343; RRID:AB_2799508
Rabbit polyclonal anti-Caspase-6 Cell Signaling Technology Cat#9762; RRID:AB_10829240
Rabbit monoclonal anti-Caspase-7 (clone D2Q3L) Cell Signaling Technology Cat#12827; RRID:AB_2687912
Mouse monoclonal anti-Caspase-9 (clone C9) Cell Signaling Technology Cat#9508; RRID:AB_2068620
Rabbit monoclonal anti-GSDMD (clone EPR19828) Abeam Cat#ab209845; RRID:AB_2783550
Rabbit monoclonal anti-DFNA5/GSDME (clone EPR19859) Abeam Cat#ab215191; RRID:AB_2737000
Mouse monoclonal anti-actin (clone AC-15) Sigma-Aldrich Cat#A5441; RRID:AB_476744
Anti-mouse CD11c (clone N418) Thermo Fisher Cat#MCD11c05; RRID:AB_10373550
Anti-mouse I-A/I-E (clone M5/114.15.2) Thermo Fisher Cat#46-5321-82; RRID:AB_1834439
Anti-mouse CD11b (clone M1/70) Thermo Fisher Cat#11-0112-82; RRID:AB_464935
Anti-mouse CD115 (clone AFS98) Thermo Fisher Cat#17-1152-82; RRID:AB_1210789
Anti-mouse CD135 (clone A2F10) Thermo Fisher Cat#12-1351-82; RRID:AB_465859
Anti-mouse MerTK (clone DS5MMER) Thermo Fisher Cat#25-5751-82; RRID:AB_2573466
Anti-mouse TCR β chain (clone H57-597) Biolegend Cat#109229; RRID:AB_10933263
Anti-mouse CD3 (clone 145-2C11) Biolegend Cat#100340; RRID:AB_11149115
Anti-mouse FasL (clone MFL3) Biolegend Cat#106606; RRID:AB_313279
Anti-phycoerythrin antibody (clone PE001) Biolegend Cat#408102; RRID:AB_2168924
Anti-mouse FasL blocking antibody (clone MFL3) Biolegend Cat#106612; RRID:AB_2813954
Armenian Hamster IgG isotype control antibody Biolegend Cat#400940; RRID:AB_11203529
Anti-human FasL blocking antibody (clone NOK-1) Biolegend Cat#306415; RRID:AB_2810458
Mouse IgG1, κ isotype control antibody (clone MOPC-21) Biolegend Cat#400165; RRID:AB_11150399
Biotinylated polyclonal goat anti-mouse IL-1β R&D Systems Cat#BAF401; RRID:AB_356450
Goat anti-mouse IgG (H+L) Jackson ImmunoResearch Cat#115-035-146; RRID:AB_2307392
Donkey anti-Rabbit IgG (H+L) Jackson ImmunoResearch Cat#711-035-152; RRID:AB_10015282
Donkey anti-Rat IgG (H+L) Jackson ImmunoResearch Cat#712-035-150; RRID:AB_2340638
Bovine anti-Goat IgG (H+L) Jackson ImmunoResearch Cat#805-035-180; RRID:AB_2340874
Rat anti-mouse CD16/CD32 (clone 93) Thermo Fisher Cat#16-0161-86; RRID:AB_468900
Bacterial and Virus Strains
Bacteroidis fragilis (strain NCTC 9343) Laboratory of Dr. Laurie Comstock ATCC 25285
Chlamydia trachomatis (strain D/UW-3/Cx) Laboratory of Dr. Michael Starnbach ATCC VR-85
Biological Samples
Human peripheral blood mononuclear cells Brigham and Women’s Hospital Kraft Family Blood Donor Center N/A
Chemicals, Peptides, and Recombinant Proteins
Recombinant, multimeric FasL (MegaFasL) Adipogen Cat#AG-40B-0130-C010
Pam3CSK4 Invivogen Cat#tlrl-pms
Nigericin Invivogen Cat#tlrl-nig
MSU Crystals Invivogen Cat#tlrl-msu
Alpha Galactosylceramide Dr. Gurdyal Besra N/A
Recombinant murine GM-CSF Peprotech Cat#315-03
Recombinant human GM-CSF Peprotech Cat#300-03
Recombinant murine IL-2 Peprotech Cat#212-12
Recombinant murine IL-7 Peprotech Cat#217-17
Recombinant human IL-2 Peprotech Cat#200-02
Mouse PBS-57 CD1d-APC tetramer NIH Tetramer Core Facility N/A
Collagenase, type 4 Worthington Biochemical Cat#LS004186
DNase 1 Sigma-Aldrich Cat#DN25
ACK lysing buffer Thermo Fisher Cat#A1049201
SYTOX Green Thermo Fisher Cat#S34860
YOYO-1 Thermo Fisher Cat#Y3601
Annexin V Alexa Fluor 488 Thermo Fisher Cat#A13201
Annexin V Alexa Fluor 647 Thermo Fisher Cat#A23204
Annexin V APC Biolegend Cat#640941
SiR-DNA Cytoskeleton, Inc Cat#CY-SC007
FluoroBrite DMEM Thermo Fisher Cat#A1896702
Opti-MEM Thermo Fisher Cat#11058021
Poly-D-Lysine Sigma-Aldrich Cat#A-003-E
Glycine Sigma-Aldrich Cat#G7126
CellTrace Violet Thermo Fisher Cat#C34557
Zombie Green Fixable Viability Dye Biolegend Cat#423112
Dynabeads MyOne Streptavidin T1 Thermo Fisher Cat#65601
Trichloroacetic acid Sigma-Aldrich Cat#91228
ActinGreen-488 Thermo Fisher Cat#R37110
Hoechst 33342 Thermo Fisher Cat#H3570
SlowFade Diamond Antifade Mountant Thermo Fisher Cat#S36963
Brain Heart Infusion broth Anaerobe Systems Cat#AS-872
Ficoll-Paque PLUS GE Lifesciences Cat#17144003
Critical Commercial Assays
Mouse IL-1β ELISA kit Thermo Fisher Cat#88-7013-77; RRID:AB_2574944
Mouse IFNγ ELISA kit Thermo Fisher Cat#88-7314-77; RRID:AB_2575068
Human IL-1β ELISA kit Thermo Fisher Cat#88-7261-88; RRID:AB_2575054
Pierce™ LDH cytotoxicity assay Thermo Fisher Cat#88954
Anti-mouse CD11c microbeads, ultrapure Miltenyi Biotec Cat#130-108-338
Mouse Pan T Cell Isolation Kit II Miltenyi Biotec Cat#130-095-130
Anti-APC microbeads Miltenyi Biotec Cat#130-090-855
Anti-human CD14 microbeads, ultrapure Miltenyi Biotec Cat#130-118-906
Pierce BCA Protein Assay Thermo Fisher Cat#23227
eBioscience Intracellular Fixation & Permeabilization Buffer Set Thermo Fisher Cat#88-8824-00
Click-iT Plus TUNEL Assay, Alexa Fluor 647 dye ThermoFisher Cat#C10619
Deposited Data
ImmGen Consortium Heng et al., 2008 https://www.immgen.org
Experimental Models: Cell Lines
Primary murine splenic iNKT cell line This paper N/A
Primary human iNKT cell clone J24L.17 Brigl et al., 2006 N/A
Experimental Models: Organisms/Strains
Mouse: Fas−/−: B6.MRL-Faslpr/J Jackson Laboratories JAX stock #000482
Mouse: Caspase1/11−/−: B6N.129S2-Casp1tm1Flv/J Jackson Laboratories JAX stock #016621
Mouse: CD1d−/− Exley et al., 2003 N/A
Mouse: Caspase-8DA/DA Philip et al., 2016 N/A
Mouse: Gsdmd−/− Kambara et al., 2018 N/A
Mouse: Ripk3−/− Newton et al., 2004 N/A
Mouse: Mlkl−/− Murphy et al., 2013 N/A
Mouse: Ripk3−/−Casp8−/− Kaiser et al., 2011 N/A
Mouse: Gsdme−/−: C57BL/6N-Gsdmeem1Fsha/J Jackson Laboratories JAX stock #032411
Mouse: Gsdmd−/−Gsdme−/− Chen et al., 2019 N/A
Mouse: Asc−/− Ozören et al., 2006 N/A
Mouse: WT: C57BL/6NJ (control for Gsdme−/− mice) Jackson Laboratories JAX stock #005304
Mouse: WT: C57BL/6 Jackson Laboratories JAX stock #000664
Mouse: Nlrp3−/−: B6.129S6-Nlrp3tm1Bhk/J Jackson Laboratories JAX stock #021302
Software and Algorithms
FlowJo (v10.5.3) BD Biosciences https://www.flowjo.com/
R (V3.3.2) R Foundation for Statistical Computing http://www.R-project.org
Fiji / ImageJ version 2.0.0 Fiji contributors / ImageJ developers https://imagej.net/Fiji
Zen (v2.3) Zeiss https://www.zeiss.com/microscopy/us/products/microscope-software/zen.html
MetaXpress (v6.0) Molecular Devices https://www.moleculardevices.com/products/cellular-imaging-systems/acquisition-and-analysis-software/metaxpress
GraphPad Prism 7 GraphPad Software https://www.graphpad.com/
Multiplot Studio v2 GenePattern, Broad Institute https://www.genepattern.org/
Other
96-well plate | No. 1.5 Coverslip | 5 mm Glass Diameter | Poly-D-Lysine Coated MatTek Corporation Cat#P96GC-1.5-5-F
Greiner Bio-One SensoPlate 96-Well Glass Bottom Microplates Greiner Bio-One Cat#655892