Table 1.
The statistical values of genetic diversity within populations from different ecological groups
Taxon | Apricot accessions groups | Private allele number (AP) | Effective site | SNP number | Ho | He | FIS | θw | Tajima’s D |
---|---|---|---|---|---|---|---|---|---|
Wild P. armeniaca | DZG | 11,069 | 417,961 | 402,703 | 0.260 | 0.378 | 0.071 | 2.02E-03 | 1.035 |
Cultivated P. armeniaca | CAG | 3784 | 417,961 | 390,892 | 0.251 | 0.405 | 0.078 | 1.52E-03 | 0.844 |
NCG | 202 | 416,708 | 308,930 | 0.223 | 0.407 | 0.033 | 2.20E-03 | 0.468 | |
EG | 11 | 411,449 | 266,769 | 0.218 | 0.406 | 0.030 | 2.05E-03 | 0.510 | |
Wild P. sibirica | NAG | 0 | 385,166 | 189,976 | 0.155 | 0.391 | 0.031 | 1.52E-03 | 0.220 |
Ho observed heterozygosity, He expected heterozygosity, π nucleotide diversity, θw Watterson’s theta, FIS inbreeding coefficient of an individual relative to the population