TABLE 1.

Best partitioning scheme and nucleotide substitution models for nrDNA and 77 CDS data determined by PartitionFinder v2.1.1.

Data type	Subset	Partition names	Best model
nrDNA	1	ETS	HKY + G
	2	ITS1, ITS2	SYM + G
	3	5.8s rRNA	K80
77 CDS	1	cpCDS_1stpos	GTR + I + G
	2	cpCDS_2stpos	GTR + I + G
	3	cpCDS_3stpos	GTR + I + G

The models of evolution include gamma distributed rate variation among sites (G) and the proportion of invariable sites (I).