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. 2020 Apr 24;11:361. doi: 10.3389/fpls.2020.00361

TABLE 3.

Genes contained in Saxifragaceae plastomes (113 genes in total).

Category Group of gene Name of gene
Self-replication Ribosomal RNA genes rrn4.5a rrn5a rrn16a rrn23a
Transfer RNA genes trnA-UGCa* trnF-GAA trnH-GUG trnL-CAAa trnN-GUUa trnR-UCU trnT-GGU trnW-CCA trnC-GCA trnfM-CAU trnI-CAUa trnL-UAA* trnP-UGG trnS-GCU trnT-UGU trnY-GUA trnD-GUC trnG-GCC* trnI-GAUa* trnL-UAG trnQ-UUG trnS-GGA trnV-GACa trnE-UUC trnG-UCC trnK-UUU* trnM-CAU trnR-ACGa trnS-UGA trnV-UAC*
Small subunit of ribosome rps2 rps8 rps15 rps3 rps11 rps16* rps4 rps12a,b** rps18 rps7a rps14 rps19a
Large subunit of ribosome rpl2a rpl22 rpl36 rpl14 rpl23a rpl16* rpl32 rpl20 rpl33
RNA polymerase subunits rpoA rpoB rpoC1* rpoC2
Photosynthesis Subunits of photosystem I psaA psaJ psaB ycf3** psaC psaI
Subunits of photosystem II psbA psbE psbJ psbN psbB psbF psbK psbT psbC psbH psbL psbZ psbD psbI psbM
Subunits of cytochrome petA petL petB* petN petD* petG
Subunits of ATP synthase atpA atpH atpB atpI atpE atpF*
Large subunit of Rubisco rbcL
Subunits of NADH Dehydrogenase ndhA* ndhE ndhI ndhBa* ndhF ndhJ ndhC ndhG ndhK ndhD ndhH
Other genes Translational initiation factor infA
Maturase matK
Envelope membrane protein cemA
Subunit of acetyl-CoA accD
C-type cytochrome synthesis gene ccsA
Protease clpP**
Unknown function Conserved open reading frames ycf1a (part) ycf2a ycf4

aTwo gene copies in IRs; bgene divided into two independent transcription units; one and two asterisks indicate one- and two-intron containing genes, respectively.