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. 2020 Apr 30;9(18):e00117-20. doi: 10.1128/MRA.00117-20

TABLE 1.

Summary of genome sequences reported

Strain BioSample accession no. GenBank accession no. SRA accession no. Diagnosis Host origin department in Colombia No. of contigs >0 bp No. of contigs >1,000 bp Genome size (bp)a Coverage (×) GC content (%)b N50 (bp)b No. of genes Population
GCT27 SAMN13950472 CP048601 SRR11183158 Chronic active gastritis Valle del Cauca 57 32 1,643,791 102 39.000 110,298 1,559 hspAfrica1WAfricaNAmerica
GCT43 SAMN13950473 CP048600 SRR11183157 Chronic active gastritis Risaralda 68 35 1,642,398 102 39.046 98,340 1,566 hspAfrica1SAfricaMiscAmerica
GCT97 SAMN13950474 CP048599 SRR11183156 Chronic active gastritis Tolima 60 40 1,656,586 103 38.847 94,297 1,569 hspSWEuropeColombia
a

Including contigs of ≥0 bp.

b

Based on contigs of ≥500 bp.