TABLE 1.
Country | Breed | Number of animals | Year of birth | Number of SNPs remaining |
Number of SNPs removed |
||
5MAF | 6CR | 7HWE | |||||
Norway | 1NWS | 792 | 1977 to 2016 | 526,044 | 34,189 | 16,141 | 793 |
New Zealand | Finn | 50 | 1997 to 2005 | 482,501 | 79,316 | 15,350 | 0 |
Primera | 8,554 | 2008 to 2016 | 502,238 | 26,145 | 14,096 | 34,688 | |
Texel | 220 | 1985 to 2016 | 504,836 | 57,631 | 14,551 | 149 | |
2DP | 1,831 | 1996 to 2016 | 526,874 | 30,492 | 17,401 | 2,400 | |
3LambSup | 6,092 | 1995 to 2016 | 525,952 | 29,300 | 13,626 | 8,289 | |
4TS | 165 | 2005 to 2016 | 526,175 | 34,048 | 16,893 | 51 | |
All | 17,704 | 1977 to 2016 | 523,355 | 25,031 | 13,880 | 14,901 |
1NWS, Norwegian White Sheep; 2DP, “Other Dual Purpose”; 3LambSup, Lamb Supreme; 4TS, “Other Terminal Sire”, 5MAF, minor allele frequency lower than 0.01; 6CR, call rate lower than 95%; 7HWE, Hardy Weinberg equilibrium (p-value < 10–15).