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. 2020 Apr 24;11:371. doi: 10.3389/fgene.2020.00371

TABLE 3.

Descriptive statistics of the runs of homozygosity (ROH) for the Norwegian White Sheep (NWS) and New Zealand sheep populations.

NWS Finn Primera Texel DP LambSup TS
Ntotal 38,188 2,585 139,971 20,071 103,033 197,510 6,939
Min SNPs 50 35 55 46 54 56 41
nSEG 48.2 [0–85] 51.7 [29–78] 16.4 [0–89] 91.2 [32–131] 56.3 [2–132] 32.4 [3–82] 42.1 [8–136]
Kbi 177,692 [0–647,569] 217,651 [71,553–353,140] 37,609 [0–547,796] 313,411 [82,556–647,105] 164,412 [10,949–773,087] 78,717 [5,295–348,486] 144,698 [13,644–775,800]
Kb 3,685 [1,000–82,746] 4,210 [1,001–67,656] 2,298 [1,000–94,879] 3,435 [1,000–75,723] 2,922 [1,000–131,632] 2,428 [1,000–58,583] 3,441 [1,000–44,028]
nSNP 775 [100–17,105] 811 [101–13,401] 443 [100–18,753] 694 [100–15,323] 616 [100–27,778] 502 [100–12,472] 719 [101–9,515]
density 4.9 [3.3–14] 5.4 [3.7–14.6] 5.5 [3.1–16.1] 5.0 [3.3–13.8] 4.8 [3.0–16.8] 5.0 [3.1–21.2] 4.9 [3.3–13.9]
phom 0.997 [0.893–1] 0.997 [0.963–1] 0.996 [0.874–1] 0.997 [0.940–1] 0.997 [0.912–1] 0.997 [0.890–1] 0.997 [0.932–1]

Sheep populations from New Zealand are: Finn, Primera, Texel, “Other Dual Purpose” (DP), Lamb Supreme (LambSup), and “Other Terminal Sire” (TS). Ntotal: total number of segments. Min SNPs: minimum number of single nucleotide polymorphisms (SNP) in a ROH, calculated as suggested by Lencz et al. (2007). nSEG: average number of segments for the individual declared homozygous. Kbi: average size of total homozygous segments per individual. Kb, average of total number of kb contained within homozygous segments. nSNP, average number of SNPs in run. Density, inverse SNP density in Kb/SNP. Phom, proportion of sites homozygous. Minimum and maximum values are shown inside brackets.