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. 2020 May 1;78(4):779–784.e5. doi: 10.1016/j.molcel.2020.04.022
REAGENT or RESOURCE SOURCE IDENTIFIER
Antibodies

Monoclonal anti-HA antibody produced in mouse Sigma-Aldrich Cat.#: H3663; RRID: AB_262051
Monoclonal anti-β-actin antibody produced in mouse Sigma-Aldrich Cat.#: A5441; RRID: AB_476744
Monoclonal anti-VSV-M (23H12) antibody KeraFast Cat.#: EB0011; RRID: AB_2734773
Monoclonal anti-mouse, peroxidase-coupled Dianova Cat.#: 115-035-003; RRID: AB_10015289
Anti-VSV-G antibody (I1, produced from CRL-2700 mouse hybridoma cells) ATCC Cat.# CRL-2700; RRID: CVCL_G654

Bacterial and Virus Strains

VSVΔG-FLuc Berger Rentsch and Zimmer, 2011 N/A
One Shot™ OmniMAX™ 2 T1R Chemically Competent E. coli Thermo Fisher Scientific Cat.#: C854003

Chemicals, Peptides, and Recombinant Proteins

Lipofectamine LTX with Plus Reagent Thermo Fisher Scientific Cat.#: 15338100
Furin inhibitor, decanoyl-RVKR-CMK Tocris Cat.#: 3501
May-Grünwald solution Sigma-Aldrich Cat.#: 63590
Giemsa solution Sigma-Aldrich Cat.#: GS500

Critical Commercial Assays

Beetle-Juice Kit PJK Cat.#: 102511

Experimental Models: Cell Lines

293T DSMZ Cat.#: ACC-635; RRID: CVCL_0063
Calu-3 Laboratory of Stephan Ludwig ATCC Cat# HTB-55; RRID: CVCL_0609
Vero Laboratory of Andrea Maisner ATCC Cat# CRL-1586; RRID: CVCL_0574
Vero-TMPRSS2 Hoffmann et al., 2020 N/A

Oligonucleotides

SARS-S (BamHI) F CTTGGATCCGCCACCATGTTTATTTTC
TTATTATTTC
Sigma-Aldrich N/A
SARS-SΔ18 (XbaI) R CTTTCTAGACTACTTGCAGCAAGAA
CCACAAGAGC
Sigma-Aldrich N/A
SARS-SΔ18 (-)STOP (XbaI) R CTTTCTAGACTTGCAGCAAG
AACCACAAGAGC
Sigma-Aldrich N/A
SARS-2-S (BamHI) F GAATTCGGATCCGCCACCATGTTCGT
GTTTCTGGTGCTGC
Sigma-Aldrich N/A
SARS-2-SΔ18 (XbaI) R AAGGCCTCTAGACTACTTGCAGCA
GCTGCCACAGC
Sigma-Aldrich N/A
SARS-2-SΔ18 (-)STOP (XbaI) R AAGGCCTCTAGACTTGCA
GCAGCTGCCACAGC
Sigma-Aldrich N/A
SARS-S (SARS) F CAGACAAACAGCCCCAGACGGGCCAG
AAGTACTAGCCAAAAATCTATTG
Sigma-Aldrich N/A
SARS-S (SARS) R TCTGGCCCGTCTGGGGCTGTTTGTCT
GTGTATGGTAACTAGCACAAATGC
Sigma-Aldrich N/A
SARS-S (RaTG) F CAGACAAACAGCAGAAGTACTAGCCA
AAAATC
Sigma-Aldrich N/A
SARS-S (RaTG) R TCTGCTGTTTGTCTGTGTATGGTAACTA
GCACAAATGC
Sigma-Aldrich N/A
SARS-2-S (SARS) F GTTTCTTTATTACGTTCTGTGGCCAGC
CAGAGCATC
Sigma-Aldrich N/A
SARS-2-S (SARS) R ACGTAATAAAGAAACTGTCTGGTAGC
TGGCACAGATG
Sigma-Aldrich N/A
SARS-2-S (RaTG) F CAGACAAACAGCAGATCTGTGGCCAGC
CAGAGCATC
Sigma-Aldrich N/A
SARS-2-S (RaTG) R GCTGGCCACAGATCTGCTGTTTGTCTG
TGTCTGGTAGC
Sigma-Aldrich N/A
SARS-2-S (delta) F CAAACAGCCCCGCATCTGTGGCCAGCC
AGAGCATC
Sigma-Aldrich N/A
SARS-2-S (delta) R GCTGGCCACAGATGCGGGGCTGTTTGTC
TGTGTCTGGTAGC
Sigma-Aldrich N/A
SARS-2-S (opt) F CGAAGACGAAAAAGATCTGTGGCCAGCCA
GAGCATC
Sigma-Aldrich N/A
SARS-2-S (opt) R TCTTTTTCGTCTTCGGCTGTTTGTCTGTGT
CTGG
Sigma-Aldrich N/A
pCG1 Seq F CCTGGGCAACGTGCTGGT Sigma-Aldrich N/A
pCG1 Seq R GTCAGATGCTCAAGGGGCTTCA Sigma-Aldrich N/A
SARS-S 387F TGTTATACGAGCATGTAAC Sigma-Aldrich N/A
SARS-S 790F AAGCCAACTACATTTATGC Sigma-Aldrich N/A
SARS S 1194F TGATGTAAGACAAATAGCG Sigma-Aldrich N/A
SARS S 1575F TATTAAGAACCAGTGTGTC Sigma-Aldrich N/A
SARS S 1987F GTGCTAGTTACCATACAG Sigma-Aldrich N/A
SARS S 2391F CTAAAGCCAACTAAGAGG Sigma-Aldrich N/A
SARS S 2787F TCAACTGCATTGGGCAAG Sigma-Aldrich N/A
SARS-2-S 651F CAAGATCTACAGCAAGCACACC Sigma-Aldrich N/A
SARS-2-S 1380F GTCGGCGGCAACTACAATTAC Sigma-Aldrich N/A
SARS-2-S 1992F CTGTCTGATCGGAGCCGAGCAC Sigma-Aldrich N/A
SARS-2-S 2648F TGAGATGATCGCCCAGTACAC Sigma-Aldrich N/A
SARS-2-S 3286F GCCATCTGCCACGACGGCAAAG Sigma-Aldrich N/A
pCG1-V5 F TCCCTAACCCTCTCCTCGGTCTCGATTCTACGTG
AAAGCTGATCTTTTTCCCTCTGCC
Sigma-Aldrich N/A
pCG1-V5 R GACCGAGGAGAGGGTTAGGGATAGGCTTACCG
CATGCCTGCAGGTTTAAACAGTCG
Sigma-Aldrich N/A
pCG1-XhoI R CTCCTCGAGTTCATAAGAGAAGAGGG Sigma-Aldrich N/A

Recombinant DNA

Plasmid: pCG1-SARS-S Hoffmann et al., 2013 N/A
Plasmid: pCG1-SARS-S-HA Hoffmann et al., 2020 N/A
Plasmid: pCG1-SARS-2-S Hoffmann et al., 2020 N/A
Plasmid: pCG1-SARS-2-S-HA Hoffmann et al., 2020 N/A
Plasmid: pCG1-SARS-SΔ18 Hoffmann et al., 2013 N/A
Plasmid: pCG1-SARS-SΔ18-V5 This paper N/A
Plasmid: pCG1-SARS-2-SΔ18 This paper N/A
Plasmid: pCG1-SARS-2-SΔ18-V5 This paper N/A
Plasmid: pCG1-SARS-SΔ18 (SARS-2) This paper N/A
Plasmid: pCG1-SARS-SΔ18-V5 (SARS-2) This paper N/A
Plasmid: pCG1-SARS-SΔ18 (RaTG) This paper N/A
Plasmid: pCG1-SARS-SΔ18-V5 (RaTG) This paper N/A
Plasmid: pCG1-SARS-2-SΔ18 (SARS) This paper N/A
Plasmid: pCG1-SARS-2-SΔ18-V5 (SARS) This paper N/A
Plasmid: pCG1-SARS-2-SΔ18 (RaTG) This paper N/A
Plasmid: pCG1-SARS-2-SΔ18-V5 (RaTG) This paper N/A
Plasmid: pCG1-SARS-2-SΔ18 (delta) This paper N/A
Plasmid: pCG1-SARS-2-SΔ18-V5 (delta) This paper N/A
Plasmid: pCG1-SARS-2-SΔ18 (opt) This paper N/A
Plasmid: pCG1-SARS-2-SΔ18-V5 (opt) This paper N/A
Plasmid: pCAGGS-MERS-S-V5 Gierer et al., 2013 N/A
Plasmid: pCAGGS-VSV-G Brinkmann et al., 2017 N/A
Plasmid: pCAGGS-DsRed Hoffmann et al., 2013 N/A
Plasmid: pCG1 Laboratory of Roberto Cattaneo N/A
Plasmid: pCG1-V5 This paper N/A

Software and Algorithms

Hidex Sense Microplate Reader Software Hidex Deutschland Vertrieb GmbH https://www.hidex.de/
ChemoStar Imager Software (version v.0.3.23) Intas Science Imaging Instruments GmbH https://www.intas.de/
ZEN imaging software Carl Zeiss https://www.zeiss.com/
Clustal Omega European Molecular Biology Laboratory – European Bioinformatics Institute (EMBL-EBI) https://www.ebi.ac.uk/Tools/msa/clustalo/; Madeira et al., 2019
Adobe Photoshop CS5 Extended (version 12.0 3 32) Adobe https://www.adobe.com/
GraphPad Prism (version 8.3.0(538)) GraphPad Software https://www.graphpad.com/
YASARA (version 19.1.27) YASARA Biosciences GmbH http://www.yasara.org/; Krieger and Vriend, 2014
Microsoft Office Standard 2010 (version 14.0.7232.5000) Microsoft Corporation https://products.office.com/home

Other

Prefusion structure of SARS-CoV spike glycoprotein (5X5B) Yuan et al., 2017 https://www.rcsb.org/structure/5X5B