Table 1.
Top cited RCC cell lines.
Histologic and genetic characteristics, including ccA and ccB sub-classification, and 3p deletion status as defined by Sinha et al., are outlined10. VHL and other known significantly mutated genes, determined by TCGA, are defined by CCLE and CCLP databases58,66,67,142.
| Cell line | Classification | Sub classification10 | Histological features | 3p status10 | VHL status66,67 | CCLE mutations66, 67 |
|---|---|---|---|---|---|---|
| (Sinha et al., 2017) | (Sinha et al., 2017) | (Barretina et al., 2012) | (Barretina et al., 2012) | |||
| 786-O | ccRCC | ccB | Poor differentiation with sarcomatoid features10 | Deleted | Null | PTEN, TP53, |
| (Sinha et al., 2017) | TSC2, MLL3 | |||||
| A-498 | ccRCC | ccB | Compact nests of tumor cells with clear cytoplasm10 | Deleted | Null | MLL3, SETD2 |
| (Sinha et al., 2017) | ||||||
| ACHN | pRCC | Unknown | Poor differentiation with sarcomatoid features10 | Deleted | Wildtype | PBRM1, NF2 |
| (Sinha et al., 2017) | ||||||
| CAKI-1 | ccRCC | ccB | Poor differentiation71 | Not Deleted | Wildtype | MET, MLL3, |
| (Korhonen et al., 1994) | SETD2 | |||||
| RCC-4 | ccRCC | Unknown | Unknown | Deleted | Null | NA |
| A-704 | ccRCC | ccA | Not tumorigenic in immunocompromised mice73 | Deleted | Null | MLL3, TP53, |
| (Giard et al., 1973) | PBRM1, SETD2 | |||||
| SN12C | Unknown | Unknown | Clear cell combined with granular morphology74 | Not Deleted | Wildtype | TP53, BAP1, |
| (Sanchez et al., 1994) | NF2 | |||||
| CAKI-2 | ccRCC | ccB | Well differentiated clear cell71 | Deleted | Wildtype | PBRM1 |
| (Korhonen et al., 1994) | ||||||
| 769-P | ccRCC | ccA | Unknown | Deleted | Null | BAP1, TSC2 |
| TK-10 | Unknown | Unknown | Unknown | Deleted | Wildtype | PIK3CA, TP53 |
| UMRC-2 | ccRCC | ccA | Unknown | Deleted | Null | NA |
| OS-RC-2 | ccRCC | ccB | Unknown | Deleted | Null | PTEN, TP53, |
| PBRM1 | ||||||
| CAL-54 | pRCC | Unknown | Well differentiated with papillary structures75 | Deleted | Wildtype | FH, MLL3 |
| (Gioanni et al., 1996) |