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. Author manuscript; available in PMC: 2021 Apr 6.
Published in final edited form as: Phys Chem Chem Phys. 2020 Apr 6;22(13):6848–6860. doi: 10.1039/d0cp00088d

Table 3:

Comparison of the averaged dipole moment values for all the solutes in the binding pockets versus in bulk solution for Drude model of P38, Factor Xa, and TYK2 protein.

Protein Solute Pocket Bulk Difference % Difference
Average Std. Error Average Std. Error
P38 Kinase BENX 0.616 0.005 0.656 0.003 −0.041 −6.60
PRPX 0.431 0.003 0.447 0.002 −0.016 −3.74
MAMY 2.741 0.005 2.740 0.001 0.001 0.05
IMIA 5.634 0.029 5.731 0.003 −0.097 −1.72
MEOH 2.546 0.003 2.630 0.002 −0.083 −3.27
AALD 3.595 0.010 3.664 0.002 −0.068 −1.90
ACEY 7.108 0.033 7.137 0.003 −0.029 −0.40
FORM 6.368 0.014 6.606 0.005 −0.238 −3.74
               
Factor Xa BENX 0.582 0.016 0.654 0.003 −0.072 −12.37
PRPX 0.418 0.012 0.443 0.002 −0.025 −5.98
MAMY 2.737 0.018 2.739 0.002 −0.002 −0.07
IMIA 5.715 0.071 5.727 0.004 −0.012 −0.21
MEOH 2.526 0.008 2.630 0.003 −0.104 −4.12
AALD 3.515 0.027 3.666 0.002 −0.151 −4.30
ACEY 7.023 0.030 7.132 0.003 −0.109 −1.55
FORM 6.402 0.038 6.600 0.006 −0.198 −3.09
               
TYK2 BENX 0.495 0.009 0.656 0.003 −0.161 −32.55
PRPX 0.407 0.008 0.449 0.001 −0.042 −10.29
MAMY 2.970 0.026 2.738 0.002 0.232 7.82
IMIA 5.488 0.042 5.732 0.003 −0.244 −4.45
MEOH 2.489 0.032 2.627 0.002 −0.139 −5.57
AALD 3.523 0.015 3.669 0.003 −0.146 −4.15
ACEY 6.931 0.012 7.134 0.003 −0.204 −2.94
FORM 6.180 0.032 6.599 0.004 −0.419 −6.78