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. 2020 May 1;15(5):e0232237. doi: 10.1371/journal.pone.0232237

Table 3. Gene expression in handball athletes compared to sedentary controls under resting conditions.

Gene id Gene name Function Fold Sd Cohen’s d P Value
IFNG Interferon gamma Acute inflammation -1.53 0.26 0.529 0.196
IFNGR1 Interferon gamma receptor 1   -1.06 0.55 0.156 0.695
IRAK1 Interleukin-1 receptor-associated kinase 1   1.34 0.39 0.474 0.269
TANK TRAF family member-associated NFKB activator   -1.04 0.59 0.114 0.775
CD81 CD81 molecule Cell communication 1.33 0.47 0.572 0.165
ITGAX Integrin alpha X (complement component 3 receptor 4 subunit)   1.27 0.60 0.757 0.076
ITGB1 Integrin beta 1   1.69 0.51 1.230 0.005
ACADS Acyl-CoA dehydrogenase, C-2 to C-3 short chain Cell energy metabolism -1.17 0.43 0.301 0.451
PDHA2 Pyruvate dehydrogenase (lipoamide) alpha 2   -5.62 0.04 0.846 0.042
ACSL1 Acyl-CoA synthetase long-chain family member 1 Cholesterol homeostasis/metabolism 1.24 0.61 0.620 0.134
CD36/FAT CD36 molecule (thrombospondin receptor)   -1.04 0.62 0.121 0.762
PPARGC1B Peroxisome proliferator-activated receptor gamma, coactivator 1 beta   1.38 0.48 0.755 0.070
SCARB1 Scavenger receptor class B, member 1   -1.03 0.62 0.099 0.803
ALDOC Aldolase C, fructose-bisphosphate Glucose homeostasis/metabolism 1.00 0.61 0.005 0.991
KLF4 Kruppel-like factor 4 (gut)   1.01 0.35 0.017 0.968
PDK4 Pyruvate dehydrogenase kinase, isozyme 4   1.29 0.49 0.587 0.150
PRKAA1 Protein kinase, AMP-activated, alpha 1 catalytic subunit   1.05 0.77 0.261 0.516
CD130 Il-6 signal transducer Immune/Inflammation 1.25 0.49 0.485 0.240
IGJ Immunoglobulin J polypeptide, linker protein for immunoglobulin alpha and mu polypeptides -1.03 0.31 0.040 0.919
IL1B Interleukin 1   1.08 0.48 0.159 0.691
IL1RN Interleukin 1 receptor antagonist   -1.16 0.68 0.561 0.173
IL6R IL-6 receptor   1.62 0.56 1.398 0.002
JACK1 Janus kinase 1   1.40 0.59 0.948 0.031
JACK2 Janus kinase 2   1.04 0.58 0.102 0.797
MAPK11 (P38) Mitogen-activated protein kinase-activated protein kinase 11   -2.19 0.29 1.070 0.031
MAPKAP K2 Mitogen-activated protein kinase-activated protein kinase 2   1.62 0.48 1.048 0.032
RPS6KB1 Ribosomal protein S6 kinase   -1.02 0.75 0.070 0.863
SELL Selectin L   -1.16 0.78 0.832 0.054
SOCS3 Suppressor of cytokine signaling 3   1.31 0.35 0.422 0.333
STAT1 Signal transducer and activator of transcription 1, 91 kDa   1.06 0.61 0.159 0.693
STAT3 Signal transducer and activator of transcription 3   1.46 0.61 1.205 0.007
CDC20 Cell division cycle 20 homolog Mineral homeostasis/metabolism 1.06 0.35 0.091 0.821
HFE Hemochromatosis   1.07 0.56 0.149 0.725
MZB1 Marginal zone B and B1 cell-specific protein   1.17 0.38 0.198 0.619
SBP2 SECIS binding protein 2   -1.02 0.72 0.081 0.840
SLC30A1 Solute carrier family 30 (zinc transporter), member 1   1.13 0.77 0.666 0.112
TRPM6 Transient receptor potential cation channel, subfamily M, member 6   1.14 0.55 0.301 0.457
TRPM7 Transient receptor potential cation channel, subfamily M, member 7   -1.05 0.54 0.131 0.743
TXNDC5 Thioredoxin domain containing 5 (endoplasmic reticulum)   1.21 0.54 0.471 0.260
ACVR1B Activin A receptor, type IB Muscle growth/size/body function 1.90 0.34 1.011 0.017
GYS 1 Glycogen synthase 1 (muscle)   -1.01 0.38 0.009 0.984
UCP3 Uncoupling protein 3 (mitochondrial, proton carrier)   1.04 0.49 0.090 0.821
HIF1A Hypoxia inducible factor 1, alpha subunit Nuclear 1.37 0.65 1.134 0.008
PPARA Peroxisome proliferator-activated receptor alpha   1.17 0.63 0.491 0.267
CAT Catalase Oxidative stress 1.09 0.73 0.406 0.314
GPX1 Glutathione peroxidase I   1.18 0.46 0.330 0.443
GPX4 Glutathione peroxidase 4   1.04 0.63 0.132 0.741
GSR Glutathione reductase   1.33 0.73 1.390 0.005
HSP70 Heat Shock protein 70kDa protein 8   -1.24 0.65 0.745 0.081
HSPB1/HSP27 Heat shock 27kDa protein 1   -1.14 0.47 0.292 0.525
MT1F Metallothionein 1F   -1.16 0.20 0.139 0.742
MT1G Metallothionein 1G   1.01 0.12 0.009 0.982
MT2A Metallothionein 2A   -1.08 0.25 0.087 0.835
MT3 Metallothionein 3   -1.77 0.05 0.321 0.428
PRDX5 Peroxiredoxin 5   1.19 0.62 0.530 0.208
SOD1 Superoxide dismutase 1   -1.07 0.71 0.289 0.473
SOD2 Superoxide dismutase 2   1.58 0.59 1.298 0.005
AK1 Adenylate kinase 1 Vitamin metabolism/transport 1.12 0.52 0.275 0.491
CTH Cystathionase (cystathionine gamma-lyase)   -1.08 0.49 0.163 0.682
DHFR Dihydrofolate reductase   -1.34 0.26 0.372 0.396
FTH1 Ferritin, heavy polypeptide 1   1.03 0.50 0.073 0.863
GGH Gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase) -1.41 0.47 0.707 0.088
MTHFD1 Methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1   -1.01 0.65 0.043 0.914
MTHFD1L Methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like   -1.23 0.55 0.550 0.177
MTHFR Methylenetetrahydrofolate reductase (NADPH)   1.25 0.52 0.572 0.166
MTR 5-methyltetrahydrofolate-homocysteine methyltransferase   1.18 0.69 0.569 0.163
MTRR 5-methyltetrahydrofolate-homocysteine methyltransferase reductase   -1.16 0.64 0.487 0.231
SHMT1 Serine hydroxymethyltransferase 1 (soluble)   1.13 0.47 0.235 0.556
SLC11A2 Solute carrier family 19 (thiamine transporter), member 2   -1.01 0.71 0.023 0.956
SLC19A1 Solute carrier family 19 (folate transporter), member 1   1.43 0.37 0.637 0.152
SLC19A2 Solute carrier family 19 (thiamine transporter), member 2   -1.10 0.54 0.262 0.511
TCN1 Transcobalamin I (vitamin B-12 binding protein, R binder family)   -1.23 0.47 0.399 0.320
TCN2 Transcobalamin II   -1.01 0.56 0.003 0.995
THTPA Thiamine triphosphatase   1.15 0.53 0.296 0.459
TPK1 Thiamin pyrophosphokinase 1   1.10 0.56 0.019 0.961
VDR Vitamin D (1,25- dihydroxyvitamin D3) receptor   1.41 0.37 0.472 0.248

FC, fold change, was calculated as the ratio of RNA levels (athletes/sedentary). Data are for mean and standard deviation fold change. The cut-off calculation score to establish a significant fold change was established as 1.5. Cohen’s d effect size were also performed to determine the effect of athletic status (small: d between 0.2 and 0.5; moderate: d between 0.5 and 0.8; and large: d > 0.8), with effect sizes below 0.2 considered trivial [35]. Differences were considered significant at p-values < 0.05.