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. 2020 May 1;11:2123. doi: 10.1038/s41467-020-15915-4

Fig. 3. Transcriptomic analysis of human vs. murine nerve explants.

Fig. 3

a, b Volcano plots of differentially regulated genes in human (a) or murine nerves (b) 2 h upon injury compared to uninjured nerves. Blue numbers indicate the number of more than two-fold down (left side) or up (right side) regulated genes. c Fold change expression of selected IEGs in murine/human nerve explants at 2 h and 24 h after injury compared to 0 h. d, e Volcano plots of differentially regulated genes in human (d) or murine nerves (e) 24 h upon injury compared to uninjured nerves. f GO (Gene ontology) terms related to immune responses were significantly altered in human and murine nerves 24 h upon injury. Source data are provided as a Source Data file. g Fold change expression of selected inflammation-related genes in murine/human nerves at 2 h and 24 h after injury compared to 0 h. Fold change in c and g was calculated from the mean normalised intensities irrespective of significance. Significantly changed values are depicted in bold. h, i TF binding motif enrichment analysis for genes significantly up-regulated at least threefold in murine nerves 2 h and 24 h (h) and for human nerves 24 h (i) after injury. P-values were calculated by Pscan Ver. 1.5 software using a two-tailed Z-test.Analysed biological replicates in ai: human n = 5, murine n = 3 for each time point.