Table 7.
The Van der Waals, Electrostatic, Polar solvation, SASA and Binding Energy of protein complexes, kJ/mol, calculated by MMPBSA method.
| Complex | Van der Waals | Electrostatic | Polar solvation | SASA | Binding Energy |
|---|---|---|---|---|---|
| CoVir NOM-HLA-A*11:01, sol no 2 | −556 +/- 8 | −2991.1 +/- 28.5 | 1354.4 +/- 20.5 | −79.46 +/- 1.2 | −2267.7 +/- 6.5 |
| CoVir NOM-HLA-A*11:01, sol no 3 | −381.9 +/- 8.7 | −2705.2 +/- 11.5 | 729.4 +/- 10.9 | −57.1 +/- 1 | −2423.3 +/- 24.9 |
| CoVir NOM-TLR4, sol no 5 | −503 +/- 5.7 | −1598.9 +/- 10.8 | 1202 +/- 6.1 | −75.4 +/- 0.3 | −978.4 +/- 7.6 |
| CoVir NOM-TLR4, sol no 6 | −407.6 +/- 5.9 | −1406.8 +/- 23.4 | 1009.3 +/- 12.3 | −64.8 +/- 0.6 | −865.7 +/- 10.6 |