TABLE 3.

The potential target PCGs of six lncRNAs, including Pearson correlation analysis between six lncRNAs and PCGs, differential expression of PCGs (LSCC compared with normal samples), and Kaplan–Meier survival analysis (log-rank method) of PCGs.

lncRNA	Pearson correlation analysis			Differential expression of PCGs			Survival P-value
	PCGs	Cor	P-value	logFC	P-value	FDR
LINC02154	AKR1B1	0.233	0.009575	1.030	0.002855	0.008849	0.776012
LINC02154	ALDH3A1	−0.215	0.017196	−2.237	2.47E-06	1.97E-05	0.776116
LINC02154	ATP2B1	0.183	0.042640	1.160	0.000358	0.001501	0.245751
LINC02154	FADS1	0.390	8.12E-06	3.083	8.95E-14	3.08E-12	0.052014
LINC02154	FADS2	0.207	0.021816	3.094	1.21E-09	2.01E-08	0.518103
LINC02154	FBN2	0.356	5.34E-05	5.073	1.10E-08	1.51E-07	0.434999
LINC02154	FTL	0.262	0.003363	1.232	5.25E-05	0.000286	0.511502
LINC02154	GPNMB	0.302	0.000687	1.853	6.69E-06	4.73E-05	0.875062
LINC02154	GSTA1	−0.222	0.013576	−1.576	0.019205	0.043548	0.700020
LINC02154	KIAA1549L	0.237	0.008335	1.555	0.009496	0.024180	0.562459
LINC02154	MANSC1	−0.303	0.000660	−1.399	5.88E-07	5.50E-06	0.145584
LINC02154	MYH14	−0.231	0.010171	−1.259	5.20E-05	0.000284	0.598905
LINC02154	NDRG4	0.273	0.002260	1.274	0.007745	0.020398	0.887394
LINC02154	NDUFS1	−0.330	0.000190	−1.034	1.29E-12	3.65E-11	0.094758
LINC02154	PGD	−0.259	0.003761	−1.243	1.38E-05	8.96E-05	0.536211
LINC02154	RGMA	−0.232	0.009891	−1.203	0.000595	0.002330	0.781241
LINC02154	SEL1L3	0.214	0.017372	1.008	0.000550	0.002174	0.295679
LINC02154	SLC1A4	0.178	0.048385	1.326	5.97E-07	5.57E-06	0.751310
LINC02154	SLC25A36	0.179	0.047966	1.068	3.94E-07	3.86E-06	0.936942
LINC02154	SLC7A11	0.188	0.036840	1.933	0.001989	0.006479	0.561165
LINC02154	SOST	0.306	0.000572	8.075	1.55E-08	2.07E-07	0.072667
LINC02154	SPP1	0.402	4.11E-06	5.081	1.63E-08	2.17E-07	0.366869
LINC02154	STC2	0.471	3.90E-08	3.868	1.83E-12	5.04E-11	0.020726∗
LINC00528	ATP13A5	0.257	0.004132	2.880	0.017906	0.041045	0.557578
LINC00528	COL4A5	0.186	0.039882	2.223	1.41E-09	2.32E-08	0.221489
LINC00528	COL4A6	0.265	0.003057	2.909	3.57E-07	3.53E-06	0.705367
LINC00528	CXCL14	0.263	0.003242	2.592	0.000117	0.000574	0.100379
LINC00528	IGFBP2	0.255	0.004425	1.135	0.021610	0.047913	0.825089
LINC00528	ISYNA1	0.312	0.000437	1.544	4.06E-05	0.000228	0.990948
LINC00528	ITM2C	0.251	0.005113	1.503	6.43E-10	1.11E-08	0.779122
LINC00528	MTCL1	0.205	0.023062	1.777	1.82E-05	0.000113	0.525657
LINC00528	NDC80	0.325	0.000244	1.213	0.000196	0.000901	0.732933
LINC00528	PADI3	0.296	0.000902	2.391	0.001807	0.005963	0.870301
LINC00528	RAB3B	0.289	0.001189	5.235	6.34E-08	7.42E-07	0.575784
LINC00528	SCD5	0.356	5.29E-05	1.548	6.81E-06	4.80E-05	0.320449
LINC00528	SERPINI1	0.423	1.11E-06	2.724	0.000397	0.001647	0.524923
LINC00528	TSPAN9	0.274	0.002158	1.339	3.15E-08	3.92E-07	0.007589∗∗
LINC00528	TYMS	0.385	1.09E-05	1.235	0.000104	0.000519	0.884710
SPRY4-AS1	SCNN1A	−0.181	0.045419	−1.609	7.72E-07	7.00E-06	0.172846
TTTY14	NOTUM	−0.329	0.000200	5.402	1.13E-06	9.87E-06	0.319919
TTTY14	MEST	−0.307	0.000557	2.178	1.64E-08	2.18E-07	0.627868
TTTY14	SMS	−0.216	0.016482	1.100	9.49E-06	6.43E-05	0.006255∗∗
LNCSRLR	SCNN1A	−0.373	2.16E-05	−1.609	7.72E-07	7.00E-06	0.172846
LNCSRLR	ZBTB7C	−0.309	0.000499	−1.278	0.000406	0.001680	0.825610
KLHL7-DT	ATP13A5	−0.196	0.029812	2.880	0.017906	0.041045	0.557578
KLHL7-DT	COL4A5	0.237	0.008280	2.223	1.41E-09	2.32E-08	0.221489
KLHL7-DT	COL4A6	0.189	0.036342	2.909	3.57E-07	3.53E-06	0.705367
KLHL7-DT	CXCL14	−0.216	0.016490	2.592	0.000117	0.000574	0.100379
KLHL7-DT	GPT2	−0.254	0.004573	−1.897	6.50E-16	3.06E-14	0.663780
KLHL7-DT	LGALS3	−0.182	0.044249	−1.209	3.98E-09	6.01E-08	0.317182
KLHL7-DT	TCEA3	−0.283	0.001501	−1.441	2.21E-08	2.84E-07	0.009314∗∗

PCGs, protein-coding genes; Cor, correlation coefficient; FC, fold change; FDR, false discovery rate. ^∗P < 0.05, ^∗∗P < 0.01.