Table 1.
Primer sequences for CLEAR network genes assessed using RT-PCR
| Primer Sequence | |
|---|---|
| Ctsd | |
| Forward | 5′-TACTCAAGGTATCGCAGGGTG-3′ |
| Reverse | 5′-CCAATGAAGACATCGCCCAG-3′ |
| Lamp1 | |
| Forward | 5′-GTAACAACGGAACCTGCCTG-3′ |
| Reverse | 5′-TCTGGTCACCGTCTTGTTGT-3′ |
| Mcoln1 | |
| Forward | 5′-GGCATTGAGGCAAAGAACCT-3′ |
| Reverse | 5′-GAATGACACCGACCCAGACT-3′ |
| Ppt1 | |
| Forward | 5′-CTCTGCTGCCTTGGTGCT-3′ |
| Reverse | 5′-AGCTGTCCCCCATCCCAT-3′ |
| Tnfa | |
| Forward | 5′-AGGGTCTGGGCCATAGAACT-3′ |
| Reverse | 5′-CCACCACGCTCTTCTGTCTAC-3′ |
| Actb | |
| Forward | 5′-CTCTCAGCTGTGGTGGTGAA-3′ |
| Reverse | 5′-AGCCATGTACGTAGCCATCC-3′ |
CLEAR, coordinated lysosome expression and regulation; Ctsd, cathepsin D; Lamp1, lysosome-associated membrane protein; Mcoln1, mucolipin 1 (TRPML1); Ppt1, palmitoyl-protein thioesterase 1; Tnfa, TNF-α; Actb, β-actin.