Table 2.
Chr | SNP | Position | Gene | Location | Effect allele | MAF cases | MAF controls | P a | OR (95% CI)b | P b | FDR | P c |
---|---|---|---|---|---|---|---|---|---|---|---|---|
4 | rs55735703 | 100057727 | ADH4 | Missense | A | 0.01 | 0.01 | 1.0000 | 0.70 (0.31–1.58) | 0.3945 | 0.7976 | 0.3830 |
4 | rs698 | 100260789 | ADH1C | Missense | G | 0.08 | 0.09 | 0.5748 | 0.92 (0.67–1.27) | 0.6049 | 0.8483 | 0.0664 |
4 | rs1693482 | 100263965 | ADH1C | Missense | A | 0.08 | 0.09 | 0.7793 | 0.92 (0.66–1.27) | 0.6117 | 0.8483 | 0.0645 |
4 | rs971074 | 100341861 | ADH7 | Synonymous | A | 0.11 | 0.13 | 1.0000 | 0.82 (0.63–1.07) | 0.1429 | 0.6576 | 0.7415 |
9 | rs2228093 | 38396002 | ALDH1B1 | Missense | A | 0.37 | 0.39 | 0.7109 | 0.90 (0.75–1.09) | 0.2769 | 0.7976 | 0.0895 |
9 | rs2073478 | 38396065 | ALDH1B1 | Missense | A | 0.31 | 0.32 | 1.0000 | 0.97 (0.80–1.17) | 0.7128 | 0.8773 | 0.0368 |
9 | rs113083991 | 38396271 | ALDH1B1 | Missense | A | 0.02 | 0.03 | 0.3328 | 0.82 (0.47–1.44) | 0.4875 | 0.8483 | 0.6004 |
9 | rs8187929 | 75540504 | ALDH1A1 | Missense | A | 0.03 | 0.04 | 0.5069 | 0.78 (0.48–1.27) | 0.3153 | 0.7976 | 0.5290 |
11 | rs58465018 | 67430748 | ALDH3B2 | Missense | G | 0.03 | 0.03 | 0.3521 | 1.05 (0.63–1.76) | 0.8450 | 0.9013 | 0.7338 |
11 | rs1551886 | 67430762 | ALDH3B2 | Missense | A | 0.09 | 0.09 | 0.2544 | 1.00 (0.74–1.37) | 0.9753 | 0.9753 | 0.6181 |
11 | rs3741178 | 67434048 | ALDH3B2 | Missense | T | 0.04 | 0.02 | 0.2544 | 2.13 (1.24–3.68) | 0.0064 | 0.1024 | 0.7677 |
11 | rs308341 | 67795299 | ALDH3B1 | Missense | A | 0.26 | 0.27 | 0.1553 | 0.95 (0.78–1.17) | 0.6362 | 0.8483 | 0.4126 |
11 | rs3751082 | 67795353 | ALDH3B1 | Missense | A | 0.26 | 0.27 | 0.0261 | 0.92 (0.75–1.12) | 0.3988 | 0.7976 | 0.4694 |
12 | rs671 | 112241766 | ALDH2 | Missense | A | 0.28 | 0.25 | 0.0199 | 1.15 (0.94–1.41) | 0.1642 | 0.6576 | 0.1748 |
15 | rs4646626 | 58256127 | ALDH1A2 | Missense | A | 0.31 | 0.31 | 1.0000 | 0.98 (0.81–1.18) | 0.8123 | 0.9013 | 0.3010 |
15 | rs3803430 | 101445815 | ALDH1A3 | Missense | G | 0.05 | 0.06 | 0.2871 | 0.76 (0.52–1.12) | 0.1644 | 0.6576 | 0.0916 |
Note: SNP, single nucleotide polymorphism; MAF, minor allele frequency. aTest for the Hardy–Weinberg equilibrium in the control samples. bCalculated by the logistic regression model adjusted for sex, age, smoking status, and drinking status. cCalculated by the logistic regression model.