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. 2020 Apr 20;18:1012–1019. doi: 10.1016/j.csbj.2020.04.009

Table 1.

Characteristics of currently available computational methods for detecting APA dynamics from scRNA-seq data.

Strategy Quantification
method
Statistical method scRNA-seq
data type
scAPA Peak calling-based log2C1+1C+1 Chi-squared test 3′ end



Sierra Peak calling-based log2E×p11pn1g1+1+1 Wilcoxon rank-sum test 3′ end



scDAPA Density distribution-based n=1NpnA-pnB2 Wilcoxon rank-sum test 3′ end,
full-length