Table 1.
Gene | Classification | Transcript | Annotation | Inheritance | Orientation | TSD | 5’ truncation |
---|---|---|---|---|---|---|---|
ATM | LPATH | NM_139312 | c.169–4insL1 | AR | − | 21 bp | 8 bp |
BRCA2a | PATH | NM_000059.3 | c.3407_3408insAlu | AD | + | 17 bp | 220 bp |
CHD8 | LPATH | NM_001170629.1 | c.5419_5420insAlu | AD | + | 16 bp | None |
DEPDC5 | PATH | NM_001242896 | c.2958_2959insAlu | AD | − | 15 bp | 211 bp |
EFTUD2 | PATH | NM_001258353 | c.1277_1278insAlu | AD | − | 16 bp | 2 bp |
ETFB | PATH | NM_001985 | c.426_427insAlu | AR | + | 16 bp | None |
MAK | PATH | NM_001242385 | c.1297_1298insAlu | AR | − | 11 bp | None |
NSD1 | PATH | NM_022455.4 | c.1926_1927insAlu | AD | − | 17 bp | None |
OCRL | PATH | NM_001587 | c.2557_2558insL1 | XL | − | 17 bp | 5657 bp |
OFD1 | PATH | NM_001330209 | c.416_417insAlu | XL | − | 15 bp | None |
RPL11 | PATH | NM_000975 | c.375_376insSVA | AD | − | 16 bp | 716 bp |
SLC26A3 | LPATH | NM_000111 | c.131+3insAlu | AR | − | 13 bp | 1 bp |
USH2A | PATH | NM_206933.2 | c.8932_8933insAlu | AR | − | 14 bp | 1 bp |
ZEB2 | PATH | NM_014795 | c.1600_1601insAlu | AD | − | 9 bp | None |
Orientation is relative to hg19.
AD autosomal dominant, AR autosomal recessive, Ins insertion, LPATH likely pathogenic, PATH pathogenic, TSD target site duplication, XL X-linked.
aSecondary finding. All other MEIs are considered diagnostic.