Table 1.
Permutation T-test results of differential abundances of the core microbiome between the gut microbial communities of three cryptic species and their juveniles.
Taxonomy (genus level) | ID | AD1 – AD2 | AD1 – AD3 | AD2 – AD3 | AD1 – JV1 | AD2 – JV2 | JV1 – JV2 |
---|---|---|---|---|---|---|---|
Actinomycetales_unclassified | Otu002 | 0.006b | 0.344 | 0.026b | 0.004a | 0.014b | 0.572 |
Bacillus | Otu017 | 0.01a | 0.176 | 0.072 | 0.372 | 0.302 | 0.012 a |
Sphingomonadaceae_unclassified | Otu045 | 0.368 | 0.868 | 0.452 | 0.008 b | 0.222 | 0.018 a |
Microbacterium | Otu051 | 0.006a | 0.012 a | 0.088 | 0.014 b | 0.032 b | 0.47 |
Rubrobacter | Otu092 | 0.05a | 0.008 a | 0.934 | 0.002 a | 0.692 | 0.052 |
Psychrobacter | Otu105 | 0.006 a | 0.006 a | 0.634 | 0.002 a | 0.022 a | 0.374 |
Synechococcus | Otu209 | 0.004 b | 0.316 | 0.03 a | 0.006 b | 0.024 a | 0.014 a |
Aeribacillus | Otu316 | 0.006 a | 0.006 a | 0.2 | 0.002 a | 0.738 | 0.5 |
Rhizobiales_unclassified | Otu003 | 0.042 b | 0.57 | 0.256 | 0.006 b | 0.042 b | 0.216 |
Gammaproteobacteria_unclassified | Otu004 | 0.032 b | 0.06 | 0.25 | 0.302 | 0.07 | 0.216 |
Rhodobacteraceae_unclassified | Otu005 | 0.032 b | 0.964 | 0.12 | 0.004 b | 0.604 | 0.07 |
Proteobacteria_unclassified | Otu006 | 0.062 | 0.82 | 0.712 | 0.024 a | 0.426 | 0.02 a |
Hyphomicrobium | Otu030 | 0.082 | 0.518 | 0.078 | 0.006 b | 0.638 | 0.31 |
Deinococcus | Otu042 | 0.016 a | 0.404 | 0.146 | 0.002 a | 0.786 | 0.24 |
Comamonadaceae_unclassified | Otu054 | 0.06 | 0.076 | 0.22 | 0.026 b | 0.03 b | 0.014 a |
Sphingomonas | Otu077 | 0.276 | 0.382 | 0.71 | 0.002 a | 0.274 | 0.268 |
Acinetobacter | Otu093 | 0.092 | 0.638 | 0.348 | 0.004 a | 0.678 | 0.28 |
Thermus | Otu337 | 0.958 | 0.734 | 0.96 | 0.002 a | 0.072 | 0.376 |
Brachymonas | Otu441 | 0.008 a | 0.01 a | 0.528 | 0.006 a | 0.54 | 0.068 |
Ralstonia | Otu496 | 0.004 a | 0.014 a | 0.234 | 0.002 a | 0.596 | 0.978 |
Propionibacterium | Otu505 | 0.176 | 0.01 a | 0.882 | 0.002 a | 0.568 | 0.194 |
Cupriavidus | Otu548 | 0.022 a | 0.184 | 0.142 | 0.002 a | 0.188 | 0.896 |
Bradyrhizobium | Otu802 | 0.012 a | 0.006 a | 0.992 | 0.472 | 0.32 | 0.136 |
Methylobacterium | Otu130 | 0.43 | 0.158 | 0.916 | 0.024a | 0.806 | 0.07 |
02d06 | Otu207 | 0.554 | 0.72 | 0.616 | 0.004b | 0.006 b | 0.268 |
Anoxybacillus | Otu498 | 0.044 a | 0.186 | 0.288 | 0.018a | 0.732 | 0.642 |
Brevinemataceae_unclassified | Otu499 | 0.038 a | 0.01 b | 0.022 b | 0.006a | 0.218 | 0.82 |
Meiothermus | Otu554 | 0.128 | 0.104 | 0.97 | 0.012a | 0.764 | 0.434 |
Enhydrobacter | Otu689 | 0.766 | 0.02a | 0.952 | 0.016a | 0.02 b | 0.472 |
Bacteria_unclassified | Otu001 | 0.004b | 0.01b | 0.264 | 0.002b | 0.238 | 0.578 |
Alphaproteobacteria_unclassified | Otu011 | 0.012b | 0.438 | 0.086 | 0.004b | 0.746 | 0.222 |
Microbacteriaceae_unclassified | Otu046 | 0.044a | 0.012a | 0.728 | 0.214 | 0.386 | 0.364 |
Pseudomonas | Otu115 | 0.004a | 0.004a | 0.14 | 0.002a | 0.048 b | 0.7 |
Geobacillus | Otu160 | 0.354 | 0.292 | 0.924 | 0.002a | 0.218 | 0.22 |
Thermoanaerobacterium | Otu454 | 0.032a | 0.962 | 0.05 b | 0.03a | 0.932 | 0.762 |
Total significantly different OTUs | 22 | 13 | 4 | 31 | 9 | 5 |
AD1, NWP1 adult; AD2, NWP2 adult; AD3, NWP3 adult; JV1, NWP1 juvenile; JV2, NWP2 juvenile. NWP1, NWP2 and NWP3 are three cryptic species of the grey mullet M. cephalus in the Taiwan Strait.
aThe former; or bthe latter component of the comparison was significantly higher.
Statistically significant values are presented in bold.