. 2020 Mar 16;10(5):1563–1574. doi: 10.1534/g3.120.401053

Table 1. P_N is proportion of polymorphic sites, MAF is the mean minor allele frequency, H_O and H_E are observed and expected heterozygosity, F_IS is the inbreeding coefficient, and d_X and _Y are Nei’s average pairwise genetic distance between individuals in a population. Bias-corrected and accelerated bootstrapped 95% confidence intervals (N = 1000) are presented in parentheses. Bolded lines are statistically significant at the P < 0.05 level. H_O, H_E, F_IS, and d_X,Y were calculated with a thinned SNP dataset of 51,011 SNPs to reduce bias in these estimates associated with linkage disequilibrium.