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. 2020 Mar 12;10(5):1553–1561. doi: 10.1534/g3.119.400972

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Copyright © 2020 McKinney et al.

This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.

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Genotypes for combined RADseq and GT-seq samples. Rows are samples ordered by sex (inferred from PCA cluster) and inversion type; columns are loci. Loci were separated by genomic feature to aid in visualization: inversion-associated loci are to the left of the dashed line and sex-associated loci are to the right of the dashed line. Within each genomic feature, loci are ordered by position. Individual genotypes are color coded with 0 and 2 representing alternate homozygous genotypes and 1 being a heterozygous genotype. Prefix of Oke_uwRAD was dropped from marker names for brevity.