Table 2. Case-control association tests for SNPs of ADD3, GPC1, ARF6 and EFEMP in 333 BA patients and 1,665 controls.

CHR	BP	SNP	Gene	Functional annotation	A1/A2	Minor Allele Frequency		Allelic P value	OR (95% CI)
						Cases	Controls
2	56108333	rs1346786	EFEMP1	intron	G/A	0.121	0.141	0.164	0.84(0.65- 1.08)
2	56115834	rs11125609	EFEMP1	intron	A/G	0.440	0.457	0.426	0.93(0.79- 1.11)
2	56118046	rs10865291	EFEMP1	intron	G/A	0.200	0.222	0.211	0.88(0.71- 1.08)
2	56120853	rs1430193	EFEMP1	intron	A/T	0.087	0.090	0.846	0.97(0.72- 1.30)
2	241359706	rs1316479	GPC1	5'upstream	A/G	0.076	0.090	0.232	0.83(0.60- 1.13)
2	241362669	rs6750380	GPC1	5'upstream	G/A	0.434	0.392	0.041	1.19(1.01- 1.41)
2	241371065	rs6707262	GPC1	5'upstream	G/A	0.438	0.392	0.027	1.21(1.02- 1.43)
2	241382083	rs7577243	GPC1	intron	G/A	0.429	0.393	0.083	1.16(0.98- 1.37)
2	241385681	rs11692341	GPC1	intron	G/A	0.476	0.445	0.139	1.13(0.96- 1.34)
2	241392025	rs13431676	GPC1	intron	A/G	0.017	0.018	0.745	0.90(0.47- 1.72)
2	241403957	rs12695020	GPC1	intron	A/G	0.317	0.325	0.687	0.96(0.81- 1.15)
2	241404499	rs2228327	GPC1	synonymous	A/G	0.129	0.124	0.700	1.05(0.82- 1.35)
2	241405528	rs2228331	GPC1	missense	G/A	0.326	0.336	0.610	0.95(0.80- 1.14)
2	241419842	rs6739196	GPC1	intron	A/G	0.048	0.051	0.747	0.94(0.64- 1.38)
10	111735750	rs17095355	ADD3	intron	T/C	0.494	0.397	3.23×10-6	1.49(1.26- 1.76)
10	111757674	rs10509906	ADD3	intron	C/G	0.173	0.235	4.78×10-4	0.68(0.55- 0.85)
10	111846687	rs2501577	ADD3	intron	G/A	0.464	0.389	2.91×10-4	1.36(1.15- 1.61)
14	50322886	rs3126184	ARF6	5'upstream	G/A	0.030	0.037	0.401	0.81(0.50- 1.32)

CHR: Chromosome; BP: Base pair; SNP: Single Nucleotide Polymorphism; OR: odds ratio; CI: confidence interval.