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. Author manuscript; available in PMC: 2020 May 7.
Published in final edited form as: Nanoscale. 2019 Nov 28;11(46):22515–22530. doi: 10.1039/c9nr06327g

Table 6.

Classifier metrics using nanoparticle trajectories to predict particle type and cellular internalization status (PS-COOH in cells, PS-COOH out of cells, PS-PEG in cells, PS-PEG out of cells) in microglial cell culture. From left to right: (1) sample size of training and test datasets after spatial checkerboard split, (2) log median predictor using diffusion coefficients at τ = 100 ms averaged over 9 μm × 9 μm windows, (3) neural network predictor trained with principal components from trajectory feature analysis using both individual and locally averaged geometric features, (4) neural network predictor trained with principal components from trajectory feature analysis excluding particles <10 px from cell surfaces using both individual and locally averaged geometric features, (5) neural network predictor trained with principal components from trajectory feature analysis excluding particles <20 px from cell surfaces using both individual and locally averaged geometric features, (6) neural network predictor limited to PS-COOH nanoparticles trained with principal components from trajectory feature analysis excluding particles <10 px from cell surfaces using both individual and locally averaged geometric features, (7) neural network predictor limited to PS-PEG nanoparticles trained with principal components from trajectory feature analysis excluding particles <10 px from cell surfaces using both individual and locally averaged geometric features

Sample size
Median predictora
Neural networka
Neural networka, b
Neural networka, c
Neural networka,c,d
Neural networka,c,e
Training Test Training Test Training Test Training Test Training Test Training Test Training Test
COOH out of cells 65 458 65 174 0.157 0.170 0.838 0.699 0.898 0.719 0.907 0.734 0.984 0.926
COOH in cells 48 825 49 832 0.207 0.208 0.935 0.787 0.966 0.804 0.977 0.837 0.982 0.852
PEG out of cells 56 517 57 097 0.159 0.154 0.946 0.847 0.965 0.850 0.973 0.865 0.985 0.979
PEG in cells 9810 9334 0.276 0.210 0.623 0.412 0.709 0.434 0.754 0.439 0.766 0.724
Avg/tot 180 610 181 437 0.200 0.185 0.836 0.686 0.885 0.702 0.903 0.719 0.983 0.889 0.875 0.852
a

Predictions performed using locally averaged features.

b

Trajectories within 10 pixels of a cell surface were excluded from predictions.

c

Trajectories within 20 pixels of a cell surface were excluded from predictions.

d

Predictor limited to PS-COOH nanoparticles to predict cell uptake status.

e

Predictor limited to PS-PEG nanoparticles to predict cell uptake status.