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. 2020 Mar 3;118(9):2220–2228. doi: 10.1016/j.bpj.2020.02.020

Figure 5.

Figure 5

Time evolution of green- and red-labeled 3D compartments with positive and negative eigenvectors, respectively, in PHi-C simulations for chromosome 6 in mouse ES cells (top), NPCs (middle), and CN cells (bottom) within time intervals t¯ = 10, 100, and 1000. The blue dots represent cumulative dots of a compartment region (128.5–134 Mb for ES cells, 128.5–134 Mb for NPCs, 128.5–134.5 Mb for CNs) with negative eigenvectors in simulation. Fig. S6 explains how to make isosurface plotting of 3D compartments from a PHi-C simulation. To see this figure in color, go online.