Table 2.
Initial State: SAW Polymer | |||||||
---|---|---|---|---|---|---|---|
Bead Pair |
Interaction Strength, εμν |
Contact Probability, pμν |
|||||
Reference | Recovered | % Error | Initial | Reference | Recovered | % Error | |
3-13 | 7.00 | 6.70 | 4.29 | 0.0033 | 0.44 | 0.46 | 4.55 |
13-23 | 7.00 | 7.28 | 4.00 | 0.0036 | 0.51 | 0.49 | 3.92 |
23-33 | 7.00 | 7.08 | 1.14 | 0.0057 | 0.39 | 0.37 | 5.13 |
33-43 | 7.00 | 7.35 | 5.00 | 0.0041 | 0.62 | 0.59 | 4.84 |
8-18 | 7.00 | 6.94 | 0.86 | 0.0056 | 0.47 | 0.47 | 0.00 |
18-28 | 7.00 | 6.89 | 1.57 | 0.0052 | 0.31 | 0.32 | 3.23 |
28-38 | 7.00 | 7.16 | 2.29 | 0.0071 | 0.55 | 0.53 | 3.64 |
3-43 | 7.00 | 7.18 | 2.57 | 0.0002 | 0.22 | 0.22 | 0.00 |
Initial State: Collapsed Polymer | |||||||
---|---|---|---|---|---|---|---|
Bead Pair |
Interaction Strength, εμν |
Contact Probability, pμν |
|||||
Reference | Recovered | % Error | Initial | Reference | Recovered | % Error | |
3-13 | 7.00 | 6.67 | 4.71 | 0.139 | 0.44 | 0.44 | 0.00 |
13-23 | 7.00 | 6.99 | 0.14 | 0.141 | 0.51 | 0.52 | 1.96 |
23-33 | 7.00 | 6.75 | 3.57 | 0.133 | 0.39 | 0.38 | 2.56 |
33-43 | 7.00 | 7.19 | 2.71 | 0.136 | 0.62 | 0.59 | 4.84 |
8-18 | 7.00 | 7.22 | 3.14 | 0.132 | 0.47 | 0.45 | 4.26 |
18-28 | 7.00 | 6.77 | 3.29 | 0.135 | 0.31 | 0.3 | 3.23 |
28-38 | 7.00 | 6.89 | 1.57 | 0.133 | 0.55 | 0.55 | 0.00 |
3-43 | 7.00 | 7.11 | 1.57 | 0.067 | 0.22 | 0.22 | 0.00 |
Values of these variables recovered using IBD are compared with those of the reference polymer chain, along with the percentage error between the reference and recovered values. Initial εμν-values for all bead pairs were chosen to be 0 for the SAW polymer, whereas εμν = 1 for all bead pairs in the collapsed polymer.