Table 3.
Various Shape Properties Based on the Eigenvalues of Gyration Tensor G Are Defined Here for Nf = 0, Nf = 1, and ICE-Normalized Contact Matrix for K562 and GM12878 Cell Lines
| Shape properties |
K562 (ON state) |
GM12878 (OFF state) |
||||
|---|---|---|---|---|---|---|
| Nf = 0 | Nf = 1 | ICE | Nf = 0 | Nf = 1 | ICE | |
| 0.058 | 0.057 | 0.078 | 0.081 | 0.066 | 0.083 | |
| 0.164 | 0.175 | 0.189 | 0.201 | 0.177 | 0.195 | |
| 0.778 | 0.768 | 0.732 | 0.718 | 0.757 | 0.722 | |
| 2.828 | 3.054 | 2.417 | 2.479 | 2.703 | 2.357 | |
| 13.412 | 13.422 | 9.356 | 8.874 | 11.563 | 8.727 | |
| B/ | 0.667 | 0.652 | 0.599 | 0.578 | 0.636 | 0.583 |
| C/ | 0.106 | 0.118 | 0.111 | 0.120 | 0.112 | 0.112 |
| S | 0.913 | 0.816 | 0.988 | 0.772 | 0.926 | 0.867 |
| κ2 | 0.545 | 0.513 | 0.537 | 0.452 | 0.525 | 0.497 |